Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1894 132 6e-26 seq732 132 6e-26 seq1005 122 1e-22 >seq1894 Length=33155 Score = 132 bits (146), Expect = 6e-26 Identities = 551/864 (64%), Gaps = 14/864 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||||| | || ||| | ||| | || || ||||| ||||||||||| | | Sbjct 23096 CCACAGTATCTTTTGATGAGAGTCAGTCTTGGAATACACGGAGAAGACATTGAGGCAGCA 23037 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | || ||||| ||| |||||| || | | || | || ||| ||||||| || || Sbjct 23036 ATAGAAACATATAACATGATGTCGCAGCGGCTATTTACACATGCATCACCAACACTATTT 22977 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || | || ||| | || || | || ||||| | | || | | || || Sbjct 22976 AACTCGGGAACAAACCGGCCACAACTCTCATCGTGCTTTTTGCTGGCAATGAGTGATGAT 22917 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || | |||||||||| || || | | ||||||| || ||||| | || || Sbjct 22916 AGCATAGAGGGTATCTATGATACACTAAAGCAGTGTGCCATGATATCAAAATCAGCAGGT 22857 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511 || ||||| || | || | | ||||||| |||| ||| || |||||| Sbjct 22856 GGAATTGGATTGAGTGTACACAACATCAGAGCCACAGGATCTTACATTGCAGGAACAAAT 22797 Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571 || ||| |||| | | |||||||| || ||||| ||| || || | ||||| Sbjct 22796 GGAACATCTAATGGAGTAGTACCAATGCTGCGTGTATTCAACCAGACTGCCAGATATGTT 22737 Query 75572 AATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATGGCAT 75625 | || ||| | |||| | || ||| || | || ||||| |||||||| Sbjct 22736 GACCA---GGGTGGAAACAAGAGACCAGGTGCATTTGCTATATATTTGGAGCCATGGCAC 22680 Query 75626 GCCGATATCATGGAGTTCCTT-GAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || ||| | | || |||||| | | | || || || ||| | |||||| || Sbjct 22679 GCAGATGTGTTTGATTTCCTTAGTCTGAAGAAG-AATCACGGTAAGGAAGAGAACCGCGC 22621 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | ||| | || | |||||||||| || || ||||||||||| ||| ||| Sbjct 22620 ACGTGATTTGTTCTATGGAATGTGGATTCCCGATCTGTTCATGAAGCGAGTTTTGGAAAA 22561 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 || |||||||||| || || ||| | |||| ||| |||||| || | | ||| || Sbjct 22560 CGGAGAATGGTCTCTATTTTGCCCACATGAGGCGCCAAATCTCTCAGAGGTGTGGGGAGA 22501 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGA---GGAGGGTAGAGCCAATGCGACTGT 75861 |||||||| || |||||||| |||||| | || |||| || || Sbjct 22500 TGAGTTTGAGAAGCTGTACACAAAATATGAAAATACACCAGGACTCGCCAGAAAGAGAGT 22441 Query 75862 ACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 |||||| | | ||| | || ||| | | ||||| | || || || || ||||| Sbjct 22440 ACCAGCTCAACAACTGTGGTATGCAATTTTAGATTCACAAATAGAAACAGGCACGCCATA 22381 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 ||| | ||||| ||||| || |||| ||| ||||| |||| |||| ||||| || Sbjct 22380 CATGTTGTACAAAGATGCGTGCAACAGCAAGTCAAACCAGCAGAACCTGGGCACAATAAA 22321 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 |||| || | || ||||| || | || ||||| | || || |||||| || Sbjct 22320 GAGCAGCAACTTGTGTACGGAGATAGTGGAATACACTGCACCTGACGAAGTGGCTGTGTG 22261 Query 76042 CAATTTGGCATCAATCGCCCTTCC 76065 |||||||||||||| || ||||| Sbjct 22260 TAATTTGGCATCAATAGCACTTCC 22237 >seq732 Length=14862 Score = 132 bits (146), Expect = 6e-26 Identities = 551/864 (64%), Gaps = 14/864 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||||| | || ||| | ||| | || || ||||| ||||||||||| | | Sbjct 9813 CCACAGTATCTTTTGATGAGAGTCAGTCTTGGAATACACGGAGAAGACATTGAGGCAGCA 9754 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | || ||||| ||| |||||| || | | || | || ||| ||||||| || || Sbjct 9753 ATAGAAACATATAACATGATGTCGCAGCGGCTATTTACACATGCATCACCAACACTATTT 9694 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || | || ||| | || || | || ||||| | | || | | || || Sbjct 9693 AACTCGGGAACAAACCGGCCACAACTCTCATCGTGCTTTTTGCTGGCAATGAGTGATGAT 9634 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || | |||||||||| || || | | ||||||| || ||||| | || || Sbjct 9633 AGCATAGAGGGTATCTATGATACACTAAAGCAGTGTGCCATGATATCAAAATCAGCAGGT 9574 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511 || ||||| || | || | | ||||||| |||| ||| || |||||| Sbjct 9573 GGAATTGGATTGAGTGTACACAACATCAGAGCCACAGGATCTTACATTGCAGGAACAAAT 9514 Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571 || ||| |||| | | |||||||| || ||||| ||| || || | ||||| Sbjct 9513 GGAACATCTAATGGAGTAGTACCAATGCTGCGTGTATTCAACCAGACTGCCAGATATGTT 9454 Query 75572 AATCAAGCGGGGCGTCGCAAGGG-----GTCCATC-GCGGTCTACTTGGAACCATGGCAT 75625 | || ||| | |||| | || ||| || | || ||||| |||||||| Sbjct 9453 GACCA---GGGTGGAAACAAGAGACCAGGTGCATTTGCTATATATTTGGAGCCATGGCAC 9397 Query 75626 GCCGATATCATGGAGTTCCTT-GAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || ||| | | || |||||| | | | || || || ||| | |||||| || Sbjct 9396 GCAGATGTGTTTGATTTCCTTAGTCTGAAGAAG-AATCACGGTAAGGAAGAGAACCGCGC 9338 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | ||| | || | |||||||||| || || ||||||||||| ||| ||| Sbjct 9337 ACGTGATTTGTTCTATGGAATGTGGATTCCCGATCTGTTCATGAAGCGAGTTTTGGAAAA 9278 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGA 75804 || |||||||||| || || ||| | |||| ||| |||||| || | | ||| || Sbjct 9277 CGGAGAATGGTCTCTATTTTGCCCACATGAGGCGCCAAATCTCTCAGAGGTGTGGGGAGA 9218 Query 75805 GGAGTTTGAAGCCCTCTACACAAAGTATGAAGA---GGAGGGTAGAGCCAATGCGACTGT 75861 |||||||| || |||||||| |||||| | || |||| || || Sbjct 9217 TGAGTTTGAGAAGCTGTACACAAAATATGAAAATACACCAGGACTCGCCAGAAAGAGAGT 9158 Query 75862 ACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 |||||| | | ||| | || ||| | | ||||| | || || || || ||||| Sbjct 9157 ACCAGCTCAACAACTGTGGTATGCAATTTTAGATTCACAAATAGAAACAGGCACGCCATA 9098 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 ||| | ||||| ||||| || |||| ||| ||||| |||| |||| ||||| || Sbjct 9097 CATGTTGTACAAAGATGCGTGCAACAGCAAGTCAAACCAGCAGAACCTGGGCACAATAAA 9038 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 |||| || | || ||||| || | || ||||| | || || |||||| || Sbjct 9037 GAGCAGCAACTTGTGTACGGAGATAGTGGAATACACTGCACCTGACGAAGTGGCTGTGTG 8978 Query 76042 CAATTTGGCATCAATCGCCCTTCC 76065 |||||||||||||| || ||||| Sbjct 8977 TAATTTGGCATCAATAGCACTTCC 8954 >seq1005 Length=21531 Score = 122 bits (134), Expect = 1e-22 Identities = 342/515 (66%), Gaps = 19/515 (4%) Strand=Plus/Minus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACC---CTGAAT 64770 |||||||| ||||| |||||| | | | ||| |||| ||||| | | | || ||| Sbjct 9844 TGGACTGCCGAAGAGGTTGATCTAGCGCATGATATTGAGCACTGGGAAAACAAACTCAAT 9785 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || ||||||| | || || || |||| ||||| || ||||| | || || ||||| Sbjct 9784 GACAATGAAAGATATTTTATCAAACACATTCTGGCCTTTTTTGCAGCCTCAGACGGAATA 9725 Query 64831 GTTTTTGAGAATATCAATAACAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTCA 64890 || ||| ||| | | || |||| | || || |||||| ||||| || Sbjct 9724 GTGAATGAAAATCTTGTTTTTAACTTTGGTAAAGAGGTTCAGATACCAGAAGCACGTAGC 9665 Query 64891 TTCTACGCATATCAATGCCATAATGA-----AATGGTTCATGGCGAAACATATTCAAAAT 64945 ||||||| || ||| || |||| ||| | || | |||| || ||| | Sbjct 9664 TTCTACGGATTCCAA----ATTATGATGGAGAATA-TCCACAGTGAAATGTACTCACTCT 9610 Query 64946 TGATTGACAAATACATTAAGGATGGATCTGAAAAGAAGCAGTTATTTGAAGCCATCCAAA 65005 |||| |||| |||||||||||||| | | ||||||| | | || | || | ||| Sbjct 9609 TGATAGACACATACATTAAGGATGAAGCAGAAAAGAGCTACCTTTTCAACGCAGTTGAAA 9550 Query 65006 CTGTACCATGTATTGAGAAG-AAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGTCT 65064 | || ||||| ||| | || || |||||||| | |||||| | || ||| Sbjct 9549 ACATTCCCTGTATC-AGACGCAAAGCCCAATGGGCATTAAAATGGATAGAAGATAAGGAG 9491 Query 65065 CGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTG-TGGAGGGTATCTTCTTCTCCGG 65123 | ||| | ||||| ||| ||| || || ||| | |||||| |||| || || || Sbjct 9490 GCCAGCTTTGGAGAGCGTCTTGCTGCATTCGC-TGTAATCGAGGGTGTCTTTTTTTCAGG 9432 Query 65124 GTCATTCTGC-GCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCT 65182 || || ||| || || | ||||||||||| | || |||||||||||||| |||| Sbjct 9431 CTCCTT-TGCTGCCATCTTCTGGTTGAAGAAAAGAGGGCTCATGCCAGGCCTTACATTCT 9373 Query 65183 CAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 |||| |||||||| | | || ||||| || ||| Sbjct 9372 CAAACGAACTTATCTGTAGGGACGAGGGCCTTCAC 9338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596555028787520