Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_020873.1 Length=158621 Score E Sequences producing significant alignments: (Bits) Value seq1765 91.5 1e-13 seq1564 91.5 1e-13 seq1200 91.5 1e-13 seq822 91.5 1e-13 seq596 91.5 1e-13 seq429 91.5 1e-13 seq1858 87.8 2e-12 seq1323 82.4 8e-11 >seq1765 Length=27004 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 157667 GTGCCGACTGTAGGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAA 157726 ||||| |||| ||||||||||| ||||||| |||||||| |||||| |||||| |||| Sbjct 17052 GTGCCTTCTGTCGGAATCGAACCGACGACCTTCTGCTTACTAGGCAGACGCTCT-GCCAA 17110 Query 157727 CTGAGCTAAGAAGGCAA 157743 |||||| |||||||||| Sbjct 17111 CTGAGCCAAGAAGGCAA 17127 >seq1564 Length=2066 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 157667 GTGCCGACTGTAGGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAA 157726 ||||| |||| ||||||||||| ||||||| |||||||| |||||| |||||| |||| Sbjct 228 GTGCCTTCTGTCGGAATCGAACCGACGACCTTCTGCTTACTAGGCAGACGCTCT-GCCAA 170 Query 157727 CTGAGCTAAGAAGGCAA 157743 |||||| |||||||||| Sbjct 169 CTGAGCCAAGAAGGCAA 153 >seq1200 Length=37878 Score = 91.5 bits (100), Expect = 1e-13 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 157667 GTGCCGACTGTAGGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAA 157726 ||||| |||| ||||||||||| ||||||| |||||||| |||||| |||||| |||| Sbjct 35639 GTGCCTTCTGTCGGAATCGAACCGACGACCTTCTGCTTACTAGGCAGACGCTCT-GCCAA 35581 Query 157727 CTGAGCTAAGAAGGCAAATT 157746 |||||| |||||||||| || Sbjct 35580 CTGAGCCAAGAAGGCAACTT 35561 >seq822 Length=66006 Score = 91.5 bits (100), Expect = 1e-13 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 157667 GTGCCGACTGTAGGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAA 157726 ||||| |||| ||||||||||| ||||||| |||||||| |||||| |||||| |||| Sbjct 42784 GTGCCTTCTGTCGGAATCGAACCGACGACCTTCTGCTTACTAGGCAGACGCTCT-GCCAA 42726 Query 157727 CTGAGCTAAGAAGGCAAATT 157746 |||||| |||||||||| || Sbjct 42725 CTGAGCCAAGAAGGCAACTT 42706 >seq596 Length=2055 Score = 91.5 bits (100), Expect = 1e-13 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 157667 GTGCCGACTGTAGGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAA 157726 ||||| |||| ||||||||||| ||||||| |||||||| |||||| |||||| |||| Sbjct 1432 GTGCCTTCTGTCGGAATCGAACCGACGACCTTCTGCTTACTAGGCAGACGCTCT-GCCAA 1490 Query 157727 CTGAGCTAAGAAGGCAA 157743 |||||| |||||||||| Sbjct 1491 CTGAGCCAAGAAGGCAA 1507 >seq429 Length=1331 Score = 91.5 bits (100), Expect = 1e-13 Identities = 71/82 (87%), Gaps = 2/82 (2%) Strand=Plus/Minus Query 157667 GTGCCGACTGTAGGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAA 157726 ||||| |||| ||||||||||| ||||||| |||||||| |||||| |||||| |||| Sbjct 473 GTGCCTTCTGTCGGAATCGAACCGACGACCTTCTGCTTACTAGGCAGACGCTCT-GCCAA 415 Query 157727 CTGAGCTAAGAAGGCAAATTGG 157748 |||||| |||||||| |||||| Sbjct 414 CTGAGCCAAGAAGGC-AATTGG 394 >seq1858 Length=105515 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 157667 GTGCCGACTGTAGGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAA 157726 ||||| |||| ||||||||||| ||||||| |||||||| |||||| |||||| |||| Sbjct 68187 GTGCCTTCTGTCGGAATCGAACCGACGACCTTCTGCTTACTAGGCAGACGCTCT-GCCAA 68129 Query 157727 CTGAGCTAAGAAGGC 157741 |||||| |||||||| Sbjct 68128 CTGAGCCAAGAAGGC 68114 >seq1323 Length=27889 Score = 82.4 bits (90), Expect = 8e-11 Identities = 67/80 (84%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 157667 GTGCCGACTGTAGGAATCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAA 157726 ||||| ||| ||||||||||| |||||| |||||||| |||||| |||||| |||| Sbjct 20427 GTGCCTTCTGCCGGAATCGAACCGGCGACCTTCTGCTTACTAGGCAGACGCTCT-GCCAA 20485 Query 157727 CTGAGCTAAGAAGGCAAATT 157746 |||||| |||||||||| || Sbjct 20486 CTGAGCCAAGAAGGCAACTT 20505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507446805309040