Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq808 87.8 2e-11 >seq808 Length=50141 Score = 87.8 bits (96), Expect = 2e-11 Identities = 154/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| || | | | || ||||| || || || |||||||||| || || Sbjct 12590 GCTTGGCCAATTCACCTGGAAGCAAAAGTCGCACAGCAGTTTGAATCTCGCGCGAGCTGA 12649 Query 1254403 TCGTGTTG--CGCTTGTTCGAGTGC-GCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGA 1254459 | ||||| | |||||| | ||| || || | ||||| | | || | || | Sbjct 12650 T--TGTTGATCTCTTGTTGTA-TGCTGCGAGTTTGGATGCCTCAGATGCAATTCTCTCAA 12706 Query 1254460 TCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGG 1254519 || || || ||||| ||||||| || ||||| | ||||||||| || || |||| Sbjct 12707 AGATATCATTTACAAATGAGTTCAGGATTGACATAGCCTTGTTGGAAATACCAGTATCGG 12766 Query 1254520 GGTGCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTA 1254559 |||||||||| ||| |||||||||||| | || ||||| Sbjct 12767 GGTGCACCTGGCGGAGGACCTTGTAGATGTAAGATGAGTA 12806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106978845609418