Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq845 141 8e-29 seq462 141 8e-29 seq1894 127 2e-24 seq732 127 2e-24 seq182 120 3e-22 >seq845 Length=10035 Score = 141 bits (156), Expect = 8e-29 Identities = 161/213 (76%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || |||||||| || ||||| ||||| || || || | Sbjct 5209 ATGCAGATCTTCGTAAAGACACTTACCGGTAAGACAATTACCCTCGAGGTTGAGCCCTCA 5268 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || || ||||||||| ||||| |||||||| || || |||||| Sbjct 5269 GATACTATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCACCAGATCAA 5328 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGATTAT 24880 ||||| ||||| || || || || || || |||||| ||| ||| ||||||| ||| Sbjct 5329 CAACGATTGATTTTCGCAGGAAAGCAACTCGAGGATGGTCG---TACATTGTCAGACTAT 5385 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| |||||||| || || | ||||||||| Sbjct 5386 AACATCCAAAAGGAGTCTACTTTGCACTTGGTG 5418 >seq462 Length=10693 Score = 141 bits (156), Expect = 8e-29 Identities = 161/213 (76%), Gaps = 6/213 (3%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || |||||||| || ||||| ||||| || || || | Sbjct 5237 ATGCAGATCTTCGTAAAGACACTTACCGGTAAGACAATTACCCTCGAGGTTGAGCCCTCA 5296 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | |||| || || ||||||||| ||||| |||||||| || || |||||| Sbjct 5297 GATACTATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCACCAGATCAA 5356 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACA-TGTCAGATTAT 24880 ||||| ||||| || || || || || || |||||| ||| ||| ||||||| ||| Sbjct 5357 CAACGATTGATTTTCGCAGGAAAGCAACTCGAGGATGGTCG---TACATTGTCAGACTAT 5413 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||||| |||||||| || || | ||||||||| Sbjct 5414 AACATCCAAAAGGAGTCTACTTTGCACTTGGTG 5446 >seq1894 Length=33155 Score = 127 bits (140), Expect = 2e-24 Identities = 539/838 (64%), Gaps = 30/838 (4%) Strand=Plus/Plus Query 139093 TTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTA 139152 || ||||| ||||||||||| || | ||||||| || || || | |||||| || || Sbjct 22258 TTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTCCGTACACAAGTTGCTG 22317 Query 139153 CACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGC 139212 | ||| || || || | || || || || || | ||| || ||||||||||| | | Sbjct 22318 CTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCACGCATCTTTGTACAAC 22377 Query 139213 ATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT-GAATTTGAACA-AGTCCCT-A 139269 || || || ||||| ||||| | ||||| |||| ||| | || | || ||| | | Sbjct 22378 ATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTGCAT---ACCACAGTTGTTGA 22434 Query 139270 GCTTGTA-----TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGT 139324 ||| ||| ||| || || | | || || || ||| ||| || | | Sbjct 22435 GCTGGTACTCTCTTTCTGGCGAGTCCTGGT-GTATTT-TCATATTTTGTGTACAGCTTCT 22492 Query 139325 CGAATCGTTCACCGTAGGCGTCAGAAAGATC--GCGACACTTGTCAGGACACATGAGCGA 139382 | || || || | | || || |||| ||| | | ||| || || | || || Sbjct 22493 CAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCTCATGT--GGGCAAAATAGAGA 22550 Query 139383 CCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAG 139442 |||| | ||||| || || ||| ||||||||||||| |||||||||| | | | Sbjct 22551 CCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATCCACATTCCATAGAA 22610 Query 139443 CAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGT-TTCATGTTAAGGAAATCAA 139501 |||||| || || || |||||| | || || | | | |||| |||||||||||| Sbjct 22611 CAAATCACGTGCGCGGTTCTCTTCCTTA-CCGTGATTCTTCTTCAGACTAAGGAAATCAA 22669 Query 139502 AAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCAC 139558 | || || ||||||||||| |||| ||| || || | ||| || | || || |||| Sbjct 22670 ACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGGTCTCTTGTTTCCAC 22729 Query 139559 CTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCG 139618 | || || || | || ||| | |||||||| |||| ||| || | | || | | Sbjct 22730 CCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGGTACTACTCCATTAG 22789 Query 139619 CTGTTCC----GTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTG 139674 |||||| ||| ||| | | | | |||| |||| || || |||||| | Sbjct 22790 ATGTTCCATTTGTTCCTGCAATGTAAGATCCTGT----GGCTCTGATGTTGTGTACACTC 22845 Query 139675 ATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATA 139734 | || ||||| || | |||| ||||| | | || | || ||| || || ||| Sbjct 22846 AATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGTATCATAGATA 22905 Query 139735 CCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTC 139794 || |||||| || || ||| | | || |||||| || || ||||| || | || Sbjct 22906 CCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTGTGGCCGGTTT 22965 Query 139795 GTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCG 139854 || || | ||| || || || || || || || | | | |||||||| | Sbjct 22966 GTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCGACATCATGTTA 23025 Query 139855 TACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCA 139912 || ||||| || || | |||| || |||||| || || | | ||||| ||||| Sbjct 23026 TATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGACTGACTCTCATCA 23083 >seq732 Length=14862 Score = 127 bits (140), Expect = 2e-24 Identities = 539/838 (64%), Gaps = 30/838 (4%) Strand=Plus/Plus Query 139093 TTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTA 139152 || ||||| ||||||||||| || | ||||||| || || || | |||||| || || Sbjct 8975 TTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACTATCTCCGTACACAAGTTGCTG 9034 Query 139153 CACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGC 139212 | ||| || || || | || || || || || | ||| || ||||||||||| | | Sbjct 9035 CTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTGTTGCACGCATCTTTGTACAAC 9094 Query 139213 ATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT-GAATTTGAACA-AGTCCCT-A 139269 || || || ||||| ||||| | ||||| |||| ||| | || | || ||| | | Sbjct 9095 ATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATTGCAT---ACCACAGTTGTTGA 9151 Query 139270 GCTTGTA-----TTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGT 139324 ||| ||| ||| || || | | || || || ||| ||| || | | Sbjct 9152 GCTGGTACTCTCTTTCTGGCGAGTCCTGGT-GTATTT-TCATATTTTGTGTACAGCTTCT 9209 Query 139325 CGAATCGTTCACCGTAGGCGTCAGAAAGATC--GCGACACTTGTCAGGACACATGAGCGA 139382 | || || || | | || || |||| ||| | | ||| || || | || || Sbjct 9210 CAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCTCATGT--GGGCAAAATAGAGA 9267 Query 139383 CCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAG 139442 |||| | ||||| || || ||| ||||||||||||| |||||||||| | | | Sbjct 9268 CCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATCCACATTCCATAGAA 9327 Query 139443 CAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGT-TTCATGTTAAGGAAATCAA 139501 |||||| || || || |||||| | || || | | | |||| |||||||||||| Sbjct 9328 CAAATCACGTGCGCGGTTCTCTTCCTTA-CCGTGATTCTTCTTCAGACTAAGGAAATCAA 9386 Query 139502 AAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCAC 139558 | || || ||||||||||| |||| ||| || || | ||| || | || || |||| Sbjct 9387 ACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGGTCTCTTGTTTCCAC 9446 Query 139559 CTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCG 139618 | || || || | || ||| | |||||||| |||| ||| || | | || | | Sbjct 9447 CCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGGTACTACTCCATTAG 9506 Query 139619 CTGTTCC----GTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTG 139674 |||||| ||| ||| | | | | |||| |||| || || |||||| | Sbjct 9507 ATGTTCCATTTGTTCCTGCAATGTAAGATCCTGT----GGCTCTGATGTTGTGTACACTC 9562 Query 139675 ATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATA 139734 | || ||||| || | |||| ||||| | | || | || ||| || || ||| Sbjct 9563 AATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGTATCATAGATA 9622 Query 139735 CCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTC 139794 || |||||| || || ||| | | || |||||| || || ||||| || | || Sbjct 9623 CCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTGTGGCCGGTTT 9682 Query 139795 GTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCG 139854 || || | ||| || || || || || || || | | | |||||||| | Sbjct 9683 GTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCGACATCATGTTA 9742 Query 139855 TACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCA 139912 || ||||| || || | |||| || |||||| || || | | ||||| ||||| Sbjct 9743 TATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGACTGACTCTCATCA 9800 >seq182 Length=36121 Score = 120 bits (132), Expect = 3e-22 Identities = 171/238 (72%), Gaps = 6/238 (3%) Strand=Plus/Plus Query 24699 ATACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAG 24758 ||| ||||||||| ||| |||| || | |||||||| || || || || || || || Sbjct 35086 ATAGGATGCAGATTTTTGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTCGAGC 35145 Query 24759 CCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCG 24818 | |||| || | |||| || || |||||||| ||||| || ||||| || || | Sbjct 35146 CTTCCGATACCATCGAAAATGTTAAGGCTAAGATCCAGGACAAGGAGGGAATTCCACCAG 35205 Query 24819 ATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAG 24875 |||||||||| ||||| ||||| || ||||| | || || || || || |||| | Sbjct 35206 ATCAACAACGATTGATTTTTGCAGGAAAACAATTAGAAGA--CG-GACGCACTTTGTCCG 35262 Query 24876 ATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGG 24933 | |||||||| || ||||| || ||| | |||||||| | || |||| || || || Sbjct 35263 ACTATAACATCCAGAAGGAGTCTACATTGCACTTGGTTCTCCGTCTGCGTGGTGGTGG 35320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449886611251120