Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq808 109 9e-18 >seq808 Length=50141 Score = 109 bits (120), Expect = 9e-18 Identities = 172/242 (71%), Gaps = 6/242 (2%) Strand=Plus/Plus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||||||||| ||||| || || ||||| || |||||| |||||| ||| || | | Sbjct 12553 TACTTGGTGACTGCCTTTGTTCCTTCTGAAACAGCGTGCTTGGCCAATTCACCTGGAAGC 12612 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTG--CGCTTGTTAGTGC 1485589 | || ||||| || || || |||||||| | || ||| ||||| | |||||| || Sbjct 12613 AAAAGTCGCACAGCAGTTTGAATCTCGCGCGAGCTGAT--TGTTGATCTCTTGTT-GTAT 12669 Query 1485590 GC-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 || || || | ||||| | | || | || | || || || ||||| |||||| Sbjct 12670 GCTGCGAGTTTGGATGCCTCAGATGCAATTCTCTCAAAGATATCATTTACAAATGAGTTC 12729 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTG 1485708 | ||| ||||| | |||||||| || || |||||||||||||| ||| |||||| Sbjct 12730 AGGATTGACATAGCCTTGTTGGAAATACCAGTATCGGGGTGCACCTGGCGGAGGACCTTG 12789 Query 1485709 TA 1485710 || Sbjct 12790 TA 12791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916038544107806