Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1894 104 2e-17 seq732 104 2e-17 seq182 95.1 1e-14 >seq1894 Length=33155 Score = 104 bits (114), Expect = 2e-17 Identities = 346/534 (65%), Gaps = 11/534 (2%) Strand=Plus/Minus Query 7591 GGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAA 7650 || || ||||| ||||||||||| || || | ||||| || | |||||||| | Sbjct 23066 GGAATACACGGAGAAGACATTGAGGCAGCAATAGAAACATATAACATGATGTCGCAGCGG 23007 Query 7651 CAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCC 7710 | ||||| || || || || || | ||| | |||| |||||| ||| ||| | || Sbjct 23006 CTATTTACACATGCATCACCAACACTATTTAACTCGGGAACAAACCGGCCACAACTCTCA 22947 Query 7711 TCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGC 7770 ||||| |||||||| | ||| | || || ||||| || || || || | || || Sbjct 22946 TCGTGCTTTTTGCTGGCAATGAGTGATGATAGCATAGAGGGTATCTATGATACACTAAAG 22887 Query 7771 GATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGC 7830 | || |||| || || |||| | || ||||| || ||| ||| || || | | Sbjct 22886 CAGTGTGCCATGATATCAAAATCAGCAGGTGGAATTGGATTGAGTGTACACAACATCAGA 22827 Query 7831 GCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTG 7890 |||| || ||| | || || |||| | | | || ||| || ||| || Sbjct 22826 GCCACAGGATCTTACATTGCAGGAACAAATGGAACATCTAATGGAGTAGTACCAATGCTG 22767 Query 7891 CGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGA---AAGCGCAAAGGCGCC 7947 || || ||||| | | | || |||| |||||||| ||| ||| | ||| || Sbjct 22766 CGTGTATTCAACCAGACTGCCAGATATGTTGACCAGGGTGGAAACAAGAGACCAGGTGCA 22707 Query 7948 GCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTG-CGTCG 8006 ||| || ||||||||||| |||||||| || | | | | || | |||| | | Sbjct 22706 TTTGCTATATATTTGGAGCCATGGCACGCAGATGTGTTTGATTTCCTTAGTCTGAAGAAG 22647 Query 8007 CAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGA 8066 | || ||| ||||| | | || || ||| | |||| ||| ||||| | ||||| Sbjct 22646 AATCA-CGGTAAGGAAGAGAACCGCGCACGTGATTTGTTCTATGGAATGTGGATTCCCGA 22588 Query 8067 TCTGTTTATGAGGCGCGTTCATTTCG---ACGCACAATGGTCGCTCATGTGCCC 8117 |||||| |||| ||| || ||| | ||| | ||||||| || | ||||| Sbjct 22587 TCTGTTCATGAAGCGAGT---TTTGGAAAACGGAGAATGGTCTCTATTTTGCCC 22537 >seq732 Length=14862 Score = 104 bits (114), Expect = 2e-17 Identities = 346/534 (65%), Gaps = 11/534 (2%) Strand=Plus/Minus Query 7591 GGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAA 7650 || || ||||| ||||||||||| || || | ||||| || | |||||||| | Sbjct 9783 GGAATACACGGAGAAGACATTGAGGCAGCAATAGAAACATATAACATGATGTCGCAGCGG 9724 Query 7651 CAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCC 7710 | ||||| || || || || || | ||| | |||| |||||| ||| ||| | || Sbjct 9723 CTATTTACACATGCATCACCAACACTATTTAACTCGGGAACAAACCGGCCACAACTCTCA 9664 Query 7711 TCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGC 7770 ||||| |||||||| | ||| | || || ||||| || || || || | || || Sbjct 9663 TCGTGCTTTTTGCTGGCAATGAGTGATGATAGCATAGAGGGTATCTATGATACACTAAAG 9604 Query 7771 GATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGC 7830 | || |||| || || |||| | || ||||| || ||| ||| || || | | Sbjct 9603 CAGTGTGCCATGATATCAAAATCAGCAGGTGGAATTGGATTGAGTGTACACAACATCAGA 9544 Query 7831 GCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTG 7890 |||| || ||| | || || |||| | | | || ||| || ||| || Sbjct 9543 GCCACAGGATCTTACATTGCAGGAACAAATGGAACATCTAATGGAGTAGTACCAATGCTG 9484 Query 7891 CGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGA---AAGCGCAAAGGCGCC 7947 || || ||||| | | | || |||| |||||||| ||| ||| | ||| || Sbjct 9483 CGTGTATTCAACCAGACTGCCAGATATGTTGACCAGGGTGGAAACAAGAGACCAGGTGCA 9424 Query 7948 GCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAATCTG-CGTCG 8006 ||| || ||||||||||| |||||||| || | | | | || | |||| | | Sbjct 9423 TTTGCTATATATTTGGAGCCATGGCACGCAGATGTGTTTGATTTCCTTAGTCTGAAGAAG 9364 Query 8007 CAACATGGGTTGCGAAGACAGCAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGA 8066 | || ||| ||||| | | || || ||| | |||| ||| ||||| | ||||| Sbjct 9363 AATCA-CGGTAAGGAAGAGAACCGCGCACGTGATTTGTTCTATGGAATGTGGATTCCCGA 9305 Query 8067 TCTGTTTATGAGGCGCGTTCATTTCG---ACGCACAATGGTCGCTCATGTGCCC 8117 |||||| |||| ||| || ||| | ||| | ||||||| || | ||||| Sbjct 9304 TCTGTTCATGAAGCGAGT---TTTGGAAAACGGAGAATGGTCTCTATTTTGCCC 9254 >seq182 Length=36121 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 || || ||||| || ||||| |||||| | ||| | ||| || | ||||| ||| Sbjct 35287 GTAGACTCCTTCTGGATGTTATAGTCGGACAAAGTGCGTCCGTCTTCTAATTGTTTTCCT 35228 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 ||||||||||| || || ||||| || || || || || || || || || || || Sbjct 35227 GCAAAAATCAATCGTTGTTGATCTGGTGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTA 35168 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTT 134696 || || | || ||||| | || || || || || ||||| |||||||| ||||| Sbjct 35167 ACATTTTCGATGGTATCGGAAGGCTCGACCTCAAGGGTGATGGTCTTACCGGTCAAAGTC 35108 Query 134697 TTAACGAAAATTTGCAT 134713 ||||| ||||| ||||| Sbjct 35107 TTAACAAAAATCTGCAT 35091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505386055644080