Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1005 199 3e-46 seq1711 104 2e-17 >seq1005 Length=21531 Score = 199 bits (220), Expect = 3e-46 Identities = 582/873 (67%), Gaps = 29/873 (3%) Strand=Plus/Minus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 || ||||| |||||||||| |||| ||| || ||| | ||||||||||| || | Sbjct 9913 AGATTTGTGATGTTTCCAATCAAATACACTGAGATTTGGAACATGTACAAAAAGGCCGAA 9854 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTT--AGCACATTGGATTG 43814 || || || ||||| || ||||| |||||| | | | || | ||||| | ||| Sbjct 9853 GCATCGTTCTGGACTGCCGAAGAGGTTGATCTAGCGCATGATATTGAGCAC-TGGGAAAA 9795 Query 43815 CATTAA---AACCACAA-GAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCG 43870 || || || |||| |||| | ||||||| || |||| |||||||| || Sbjct 9794 CA--AACTCAATGACAATGAAAGATATTTTATCAAACACATTCTGGCCTTTTTTGCAGCC 9737 Query 43871 AGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCA 43930 ||||| ||||| ||||||||| | ||| | |||| |||| ||||| ||||| Sbjct 9736 TCAGACGGAATAGTGAATGAAAATCTTGTTTTTAACTTTGGTAAAGAGGTTCAGATACCA 9677 Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990 |||||||| | || || || || |||||| || || ||||| || ||||||||| Sbjct 9676 GAAGCACGTAGCTTCTACGGATTCCAAATTATGATGGAGAATATCCACAGTGAAATGTAC 9617 Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATG-GGCACGAGAAGCATCGA-TTGTTTAATG 44048 || ||||||| || ||||| || |||| ||| || ||| | | | | || || | Sbjct 9616 TCACTCTTGATAGACACATACATTAAGGATGAAGCA-GAAAAG-AGCTACCTTTTCAACG 9559 Query 44049 C-GATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAAT 44107 | | | ||||| | |||| || | || ||||| | ||||| | ||||||||| | Sbjct 9558 CAGTTGAAAACATTCCCTG-TATCAGACGCAAAGCCCAATGGGCATTAAAATGGATAGAA 9500 Query 44108 TCAAATGATTC---TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTC 44164 || || | |||||||| || |||| || || || || | || || | || Sbjct 9499 GATAAGGAGGCCAGCTTTGGAGAGCGTCTTGCTGCATTCGCTGTAATCGAGGGTGTCTTT 9440 Query 44165 TTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTG 44224 |||||||| || ||||| ||||| || ||||| |||||| |||| | ||||| || | Sbjct 9439 TTTTCAGGCTCCTTTGCTGCCATCTTCTGGTTGAAGAAAAGAGGGCTCATGCCAGGCCTT 9380 Query 44225 ACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 || || ||||| || | || || | || || ||| | || ||||||| || || Sbjct 9379 ACATTCTCAAACGAACTTATCTGTAGGGACGAGGGCCTTCACACAGATTTTGGATGTCTG 9320 Query 44285 TTACTTGGATATCTAGGAGACGATAAGCCTTCA-TGTAAGACAATTACAGATATTGTTGT 44343 || || | || || | | || || || ||| | || | | | || ||||| Sbjct 9319 TTGTTTAGGTACCT--GCAAAGA-AAACCATCAGAGGAAAAAATCTTGAG-CATTGTCAC 9264 Query 44344 AGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGG 44403 ||| || || | || |||||||| ||| | ||| ||||| || || | || || Sbjct 9263 AGAAGCCGTTAGCATTGAACAAGAGTTTTTAACAGATGCATTGCCAGTCTCGCTTATTGG 9204 Query 44404 AATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGA 44463 |||||| || | | ||| ||||| ||||||| |||| ||| | | || | || Sbjct 9203 AATGAACCAAGTGCTCATGTGTCAATACATTGAATTTGTTGCCGATAGACTGCTAGTTGA 9144 Query 44464 AC-TGGGTTGCGATAAACACTATATTGTACAA--AACCCGTTTGATTTTATGGAAAATAT 44520 || ||||||| | |||||||| | |||| ||||| || |||||||| | || Sbjct 9143 ACTTGGGTTG-AACAAACACTACA--ACACAACCAACCCATTCAGCTTTATGGATATGAT 9087 Query 44521 TTCGTTGGAAGGCAAAACAAACTTTTTTGAAAA 44553 ||| || | |||||||| ||||| ||||| || Sbjct 9086 TTCAATGCAGGGCAAAACCAACTTCTTTGAGAA 9054 >seq1711 Length=23132 Score = 104 bits (114), Expect = 2e-17 Identities = 271/411 (66%), Gaps = 8/411 (2%) Strand=Plus/Plus Query 19435 ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGA 19494 || || ||||| || |||||| | || ||||| || || || || || |||||| | ||| Sbjct 15170 ATAGTTAATGGACCAGAAATCCTCAACAAATACGTTGGGCAGTCTGAGGAAAATATTCGA 15229 Query 19495 CGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTCTTTGCA 19553 |||||| || || |||| | | || | | || | | ||| ||||| Sbjct 15230 AAGCTGTTTGGGCCAGCAGA-GAAGGAGTATAAAGAGAAAGGAGAGGACAGTCAGTTGCA 15288 Query 19554 CATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCT------GGTGT 19607 || | ||| | || || ||||| || || |||||||||||||| || | | Sbjct 15289 TATAGTGATATTTGACGAGTTGGATGCGATATGTAAGCAAAGAGGATCAAAGAACGACGG 15348 Query 19608 AAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAACCA 19667 || || || ||| | || || || || | ||||| ||| |||| || ||| |||| Sbjct 15349 AACGGGGGTTGGTGATTCGGTAGTGAACCAGTTGCTGTCGAAAATAGATGGAGTTGACCA 15408 Query 19668 ACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGCCTT 19727 | || ||||| || | ||||| |||||||| || ||| || || || || || Sbjct 15409 GTTAAACAATATATTGTTGATTGGAATGACTAACCGAAAGGACTTGATCGATGAAGCGTT 15468 Query 19728 ATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGGACG 19787 | |||| || |||||||| | |||| || || || || ||||| ||||| Sbjct 15469 GATCAGACCTGGGCGGTTGGAGGTTCAGATTGAGGTTGGATTGCCAGATGAGGCCGGACG 15528 Query 19788 TGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTT 19838 || | ||||| || || ||||| |||| ||||| ||||||||||||| Sbjct 15529 GCTGCAGATTTTGAAGATTCATACGTCAAAGATGCGTGAAAATAACCTTTT 15579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397446534833770