Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1894 176 6e-39 seq732 176 6e-39 seq1005 114 2e-20 >seq1894 Length=33155 Score = 176 bits (194), Expect = 6e-39 Identities = 541/831 (65%), Gaps = 8/831 (1%) Strand=Plus/Plus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 ||||| || ||||| |||| ||||||||||| || || ||||||| || | Sbjct 22237 GGAAGTGCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACT 22296 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || ||||| |||||||| ||||| || ||||||| ||||| || |||||||| || Sbjct 22297 ATCTCCGTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTG 22356 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || |||||||| ||||| | |||||||||||| || || || |||| || | | ||| Sbjct 22357 TTGCACGCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATT 22416 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCT---TCCTCGTAC 118940 || | ||| | | |||||| || | |||| | || | | || || Sbjct 22417 GCATACCACAGTTGTTGAGCTGGTACTCTCTTTCTGGCGAGTCCTGGTGTATTTTCATAT 22476 Query 118941 TTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT 119000 |||||||| || |||||||| || ||| |||||||||| ||| |||| || | Sbjct 22477 TTTGTGTACAGCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCTCATGT 22536 Query 119001 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 119060 ||||| || |||||||||| || ||| ||| ||||||||||| || || || ||| Sbjct 22537 GGGCAAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATC 22596 Query 119061 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCA-A 119119 || | | |||| | ||| || ||| ||||| | || ||||| || | Sbjct 22597 CACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTCAGA 22656 Query 119120 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCT 119178 || | || || | | ||| |||||||| || |||| || | || | || ||| Sbjct 22657 CT-AAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGG 22715 Query 119179 TACGACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGG 119236 | | ||| |||||| ||||| || ||||| ||| |||||||| |||||||| Sbjct 22716 TCTCTTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGG 22775 Query 119237 AATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 119296 | | |||| ||| |||||||| || ||| ||| ||||||||| | Sbjct 22776 TACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGTT 22835 Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356 ||| | || ||||| || ||||| | ||||| || || |||| | | || | Sbjct 22836 GTGTACACTCAATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGT 22895 Query 119357 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416 | ||||| || || || ||| | | |||| | | ||||| || | ||| Sbjct 22896 ATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTG 22955 Query 119417 AGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGA 119476 |||| | ||| || | ||| || || ||||||| || || | || | | || || Sbjct 22956 TGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCGA 23015 Query 119477 CATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACC 119527 |||| ||| || || || | | || ||||||||| ||||| || || Sbjct 23016 CATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCC 23066 >seq732 Length=14862 Score = 176 bits (194), Expect = 6e-39 Identities = 541/831 (65%), Gaps = 8/831 (1%) Strand=Plus/Plus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 ||||| || ||||| |||| ||||||||||| || || ||||||| || | Sbjct 8954 GGAAGTGCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTGTATTCCACT 9013 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || ||||| |||||||| ||||| || ||||||| ||||| || |||||||| || Sbjct 9014 ATCTCCGTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCTG 9073 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || |||||||| ||||| | |||||||||||| || || || |||| || | | ||| Sbjct 9074 TTGCACGCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAATT 9133 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCT---TCCTCGTAC 118940 || | ||| | | |||||| || | |||| | || | | || || Sbjct 9134 GCATACCACAGTTGTTGAGCTGGTACTCTCTTTCTGGCGAGTCCTGGTGTATTTTCATAT 9193 Query 118941 TTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCT 119000 |||||||| || |||||||| || ||| |||||||||| ||| |||| || | Sbjct 9194 TTTGTGTACAGCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCTCATGT 9253 Query 119001 GGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATC 119060 ||||| || |||||||||| || ||| ||| ||||||||||| || || || ||| Sbjct 9254 GGGCAAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGAATC 9313 Query 119061 CAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCA-A 119119 || | | |||| | ||| || ||| ||||| | || ||||| || | Sbjct 9314 CACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTCAGA 9373 Query 119120 CTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACCCCT 119178 || | || || | | ||| |||||||| || |||| || | || | || ||| Sbjct 9374 CT-AAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCTGG 9432 Query 119179 TACGACG--ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGG 119236 | | ||| |||||| ||||| || ||||| ||| |||||||| |||||||| Sbjct 9433 TCTCTTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATTGG 9492 Query 119237 AATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 119296 | | |||| ||| |||||||| || ||| ||| ||||||||| | Sbjct 9493 TACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATGTT 9552 Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356 ||| | || ||||| || ||||| | ||||| || || |||| | | || | Sbjct 9553 GTGTACACTCAATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGTGT 9612 Query 119357 GCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416 | ||||| || || || ||| | | |||| | | ||||| || | ||| Sbjct 9613 ATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGTTG 9672 Query 119417 AGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTGGGA 119476 |||| | ||| || | ||| || || ||||||| || || | || | | || || Sbjct 9673 TGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGCGA 9732 Query 119477 CATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACC 119527 |||| ||| || || || | | || ||||||||| ||||| || || Sbjct 9733 CATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCC 9783 >seq1005 Length=21531 Score = 114 bits (126), Expect = 2e-20 Identities = 344/518 (66%), Gaps = 25/518 (5%) Strand=Plus/Plus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||| || |||||||| | |||| ||||| || ||||| || ||||||||||| || Sbjct 9338 GTGAAGGCCCTCGTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGCCTGGCATGAGCCC 9397 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA-CAC 130145 | |||||||||||||| || ||| ||| ||||| || || |||| ||||| | || Sbjct 9398 TCTTTTCTTCAACCAGAAGATGGCAGCAAAGGAGCCTGAAAAAAAGACACCCTCGATTAC 9457 Query 130146 ACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGT-ATCAAACCACTTCA 130202 | ||||| ||| |||||||| ||| ||| || || || | || | ||| || | Sbjct 9458 A-GCGAATGCAGCAAGACGCTCTCCAA---AGCTGGCCTCCTTATCTTCTATCCATTTTA 9513 Query 130203 TCGCCCACTGCGCCTT-TTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCC 130261 ||||| || || || ||| |||||| || | | | | | || | || || | Sbjct 9514 ATGCCCATTGGGCTTTGCGTCT-GATACAGGGAATGTTTTCAACTGCGTTGAAAAGGTAG 9572 Query 130262 TTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGG 130321 ||||||||| | ||| || ||||| | ||||| | ||| || |||| | ||| Sbjct 9573 CTCTTTTCTGCTTCATCCTTAATGTATGTGTCTATCAAGAGTGAGTACATTTCACTGTGG 9632 Query 130322 ACCATT-----TCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTA 130376 | ||| |||| || || | ||||||| || ||||| |||||| | Sbjct 9633 A-TATTCTCCATCATAAT----TTGGAATCCGTAGAAGCTACGTGCTTCTGGTATCTGAA 9687 Query 130377 CCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAA 130436 |||| | |||| || | | ||| ||| || ||||| || || | ||||||| Sbjct 9688 CCTCTTTACCAAAGTTAAAAACAAGATTTTCATTCACTATTCCGTCTGAGGCTGCAAAAA 9747 Query 130437 ACGCCAGGATATACTTTAT-GAATTTCTGTTCATTCTCGTTCAG---GGTCTTCCAGTCG 130492 | ||||| || | || || ||| ||| |||||| || || || | | | ||||| Sbjct 9748 AGGCCAGAATGTGTTTGATAAAATATCT-TTCATTGTCATTGAGTTTGTTTTCCCAGTGC 9806 Query 130493 TCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||| ||| | || ||||| ||||| || |||||||| Sbjct 9807 TCAATATCATGCGCTAGATCAACCTCTTCGGCAGTCCA 9844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618420094720240