Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1005 96.9 4e-15 >seq1005 Length=21531 Score = 96.9 bits (106), Expect = 4e-15 Identities = 349/527 (66%), Gaps = 23/527 (4%) Strand=Plus/Minus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGG---AAGACTCTAAAT 94497 |||||||| |||||||| ||||| | | ||| | || | ||| || | || ||| Sbjct 9844 TGGACTGCCGAAGAGGTTGATCTAGCGCATGATATTGAGCACTGGGAAAACAAACTCAAT 9785 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || ||||||| | || || ||| |||| ||||| || ||||| | || || ||||| Sbjct 9784 GACAATGAAAGATATTTTATCAAACACATTCTGGCCTTTTTTGCAGCCTCAGACGGAATA 9725 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616 || ||| ||| | | ||||||| | | ||||| || || | | ||||| | Sbjct 9724 GTGAATGAAAATCTTGTTTTTAACTTTGGTAAAGAGGTTCAGATAC-CAGAAGCACGTAG 9666 Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTC- 94674 |||||| | | || | || ||| | | | || | || | ||| |||| Sbjct 9665 CTTCTACGGATTCCAAATT-ATGATGGAGAATATCCACAGTGAAATGTACTC---ACTCT 9610 Query 94675 --ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCA--TCCA 94730 ||||||| || |||||||||| || || |||| | || ||| || || | | Sbjct 9609 TGATAGACACATACATTAAGGATGAAGCAGAAAAGAGCTACCT-TTTCAACGCAGTTGAA 9551 Query 94731 AACAGTTCCGTGTATTCAAAAG-AAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGT 94789 |||| |||| ||||| || | | ||||| | ||||| | || ||| | || ||| Sbjct 9550 AACA-TTCCCTGTAT-CAGACGCAAAGCCCAATGGGCATTAAAATGGATAGAAGATAAGG 9493 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTT-GAGGGTATCTTCTTCTCT 94848 | ||||| ||||| || ||||| || ||| | |||||| |||| || || Sbjct 9492 AGGCCAGCTTTGGAGAGCGTCTTGCTGCATTCGC-TGTAATCGAGGGTGTCTTTTTTTCA 9434 Query 94849 GGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907 || ||||| ||| || || | ||| | ||||| |||| ||||||||||| || || Sbjct 9433 GGCTCCTT-TGCTGCCATCTTCTGGTTGAAGAAAAGAGGGCTCATGCCAGGCCTTACATT 9375 Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTG 94954 ||| ||||| ||||||| | | |||||||| || ||| ||| |||| Sbjct 9374 CTCAAACGAACTTATCTGTAGGGACGAGGGCCTTCACACAGATTTTG 9328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583246553854960