Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq1894 100 3e-16 seq732 100 3e-16 >seq1894 Length=33155 Score = 100 bits (110), Expect = 3e-16 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||||||||||||| || |||||||||||||| ||||| ||||| | |||||||| Sbjct 21298 GTGCGCAAATAGTACATACCGGTCTTGAGACCCTTTTTCCAGCCGTAGAAATGCATACTT 21357 Query 78250 GACAG-CTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | ||| || | || | || || |||||| ||||| || || || |||||||| || Sbjct 21358 GTCAGTTTTTGGTAG-TTTGGATTGTCCATGTGAATGTTCAGAGATTGTGACTGGTCAAT 21416 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTC 78335 | ||||| || ||||| |||| ||| Sbjct 21417 AAAGGCACCACGATCGGCAGCCAAGTC 21443 >seq732 Length=14862 Score = 100 bits (110), Expect = 3e-16 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTC 78249 || |||||||||||||| || |||||||||||||| ||||| ||||| | |||||||| Sbjct 8015 GTGCGCAAATAGTACATACCGGTCTTGAGACCCTTTTTCCAGCCGTAGAAATGCATACTT 8074 Query 78250 GACAG-CTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGAT 78308 | ||| || | || | || || |||||| ||||| || || || |||||||| || Sbjct 8075 GTCAGTTTTTGGTAG-TTTGGATTGTCCATGTGAATGTTCAGAGATTGTGACTGGTCAAT 8133 Query 78309 GTACGCACCGCGGTCGGCCGCCATGTC 78335 | ||||| || ||||| |||| ||| Sbjct 8134 AAAGGCACCACGATCGGCAGCCAAGTC 8160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548511402281760