Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq492 127 2e-24 seq845 116 3e-21 seq462 116 3e-21 >seq492 Length=46864 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||||||||| |||| |||||| | ||||| || || || || || || Sbjct 27371 ATGCAGATTTTTGTAAAAACCTTGACAGGCAAGACAATTACACTCGAGGTCGAGCCCTCA 27312 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | |||||| || ||||| || || ||||| || ||||| || ||| Sbjct 27311 GATACCATTGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGAATTCCACCAGACCAA 27252 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||| | || | ||| || || ||| | ||||| | ||| |||| || || ||| Sbjct 27251 CAACGTCTTATCTTCGCAGGAAAGCAACTTGAAGATGGACGAACCCTTTCAGACTATAAC 27192 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || || ||||| || | || ||||| | ||| |||| ||||| || Sbjct 27191 ATCCAGAAAGAGTCTACTCTTCACTTGGTACTTCGTCTGCGTGGTGGTAT 27142 >seq845 Length=10035 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||| || || ||||| ||| | ||||| || || || || || || Sbjct 5209 ATGCAGATCTTCGTAAAGACACTTACCGGTAAGACAATTACCCTCGAGGTTGAGCCCTCA 5268 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| ||| || || ||||| ||||| || ||||| |||||| Sbjct 5269 GATACTATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCACCAGATCAA 5328 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| || || ||| | || || || || | || || || ||| Sbjct 5329 CAACGATTGATTTTCGCAGGAAAGCAACTCGAGGATGGTCGTACATTGTCAGACTATAAC 5388 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| || || || ||||| | || | || ||||| Sbjct 5389 ATCCAAAAGGAGTCTACTTTGCACTTGGTGCTCCGCCTTCGTGGTGG 5435 >seq462 Length=10693 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || ||||| || || ||||| ||| | ||||| || || || || || || Sbjct 5237 ATGCAGATCTTCGTAAAGACACTTACCGGTAAGACAATTACCCTCGAGGTTGAGCCCTCA 5296 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | ||||| | ||||| ||| || || ||||| ||||| || ||||| |||||| Sbjct 5297 GATACTATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCACCAGATCAA 5356 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || || || || | ||| || || ||| | || || || || | || || || ||| Sbjct 5357 CAACGATTGATTTTCGCAGGAAAGCAACTCGAGGATGGTCGTACATTGTCAGACTATAAC 5416 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || ||||||||||| || || || ||||| | || | || ||||| Sbjct 5417 ATCCAAAAGGAGTCTACTTTGCACTTGGTGCTCCGCCTTCGTGGTGG 5463 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434907777118080