Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq182 104 2e-17 seq845 96.9 2e-15 seq462 96.9 2e-15 seq492 93.3 3e-14 >seq182 Length=36121 Score = 104 bits (114), Expect = 2e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| ||||| || | || || || || ||||| || || || || | | Sbjct 35091 ATGCAGATTTTTGTTAAGACTTTGACCGGTAAGACCATCACCCTTGAGGTCGAGCCTTCC 35150 Query 23671 GACACTGTTGAAA-TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | |||| | |||| | || | | ||||| || || | || |||||||| Sbjct 35151 GATACCATCGAAAATGTTAAGGCTAAGA-TCCAGGACAAGGAGGGAATTCCACCAGATCA 35209 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| || || || ||||| || |||||| | ||||||| ||||||||| ||| || || Sbjct 35210 ACAACGATTGATTTTTGCAGGAAAACAATTAGAAGACGGACGCACTTTGTCCGACTATAA 35269 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTT 23820 ||| || || ||||| ||||| || || ||| Sbjct 35270 CATCCAGAAGGAGTCTACATTGCACTTGGTT 35300 >seq845 Length=10035 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/218 (70%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 23603 TACT-TAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTT 23661 |||| || ||||||||| ||||| || || || || || || || || || ||||| ||| Sbjct 5200 TACTATAGAATGCAGATCTTCGTAAAGACACTTACCGGTAAGACAATTACCCTCGAGGTT 5259 Query 23662 GACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCG 23721 || || | || ||| |||||| | || ||| || ||||| ||||| | || Sbjct 5260 GAGCCCTCAGATACTATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCA 5319 Query 23722 CCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGC 23781 ||||||||||| || || || || || || || ||||| || || | || || || Sbjct 5320 CCAGATCAACAACGATTGATTTTCGCAGGAAAGCAACTCGAGGATGGTCGTACATTGTCA 5379 Query 23782 GATTACAACATACAAAAAGAGTCCACATTACATTTAGT 23819 || || ||||| ||||| ||||| || || || || || Sbjct 5380 GACTATAACATCCAAAAGGAGTCTACTTTGCACTTGGT 5417 >seq462 Length=10693 Score = 96.9 bits (106), Expect = 2e-15 Identities = 153/218 (70%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 23603 TACT-TAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTT 23661 |||| || ||||||||| ||||| || || || || || || || || || ||||| ||| Sbjct 5228 TACTATAGAATGCAGATCTTCGTAAAGACACTTACCGGTAAGACAATTACCCTCGAGGTT 5287 Query 23662 GACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCG 23721 || || | || ||| |||||| | || ||| || ||||| ||||| | || Sbjct 5288 GAGCCCTCAGATACTATTGAAAATGTCAAGGCAAAGATCCAGGACAAGGAAGGAATTCCA 5347 Query 23722 CCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGC 23781 ||||||||||| || || || || || || || ||||| || || | || || || Sbjct 5348 CCAGATCAACAACGATTGATTTTCGCAGGAAAGCAACTCGAGGATGGTCGTACATTGTCA 5407 Query 23782 GATTACAACATACAAAAAGAGTCCACATTACATTTAGT 23819 || || ||||| ||||| ||||| || || || || || Sbjct 5408 GACTATAACATCCAAAAGGAGTCTACTTTGCACTTGGT 5445 >seq492 Length=46864 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| | || || || || || || ||||| || || || | Sbjct 26915 ATGCAGATTTTCGTAAAAACTTTGACAGGCAAGACAATTACACTCGAGGTCGAGCCCTCA 26856 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | || ||||| ||||| ||||| | || ||||| ||| Sbjct 26855 GATACCATTGAAAACGTCAAGGCTAAAATCCAGGACAAGGAAGGGATTCCACCAGACCAA 26796 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || || || || || ||||| ||||| | ||| ||| | || || ||| Sbjct 26795 CAACGTCTCATCTTCGCAGGAAAGCAACTTGAAGATGGACGAACTCTTTCAGACTATAAC 26736 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGT 23819 || || |||||||| || | || ||||| Sbjct 26735 ATCCAGAAAGAGTCTACTCTTCACTTAGT 26707 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||| | || || || || || || ||||| || || || | Sbjct 27143 ATGCAGATTTTCGTAAAAACTTTGACAGGCAAGACAATTACACTCGAGGTCGAGCCCTCA 27084 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 || || |||||| | ||| || ||| || || ||||| | || ||||| ||| Sbjct 27083 GATACCATTGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGAATTCCACCAGACCAA 27024 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || ||| | || || || || || ||||| ||||| | ||| || | || || ||| Sbjct 27023 CAACGTCTCATCTTCGCAGGAAAGCAACTTGAAGATGGACGAACCCTTTCAGACTATAAC 26964 Query 23791 ATACAAAAAGAGTCCAC 23807 || || |||||||| || Sbjct 26963 ATCCAGAAAGAGTCTAC 26947 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||||||||| || |||||| | || || || || || || ||||| || || || Sbjct 27374 AATATGCAGATTTTTGTAAAAACCTTGACAGGCAAGACAATTACACTCGAGGTCGAGCCC 27315 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | || || |||||| | ||| || ||| || || ||||| | || ||||| Sbjct 27314 TCAGATACCATTGAAAACGTCAAAGCCAAGATTCAGGATAAGGAAGGAATTCCACCAGAC 27255 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||| ||| | || || || || || ||||| ||||| | ||| || | || || Sbjct 27254 CAACAACGTCTTATCTTCGCAGGAAAGCAACTTGAAGATGGACGAACCCTTTCAGACTAT 27195 Query 23788 AACATACAAAAAGAGTCCAC 23807 ||||| || |||||||| || Sbjct 27194 AACATCCAGAAAGAGTCTAC 27175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338001550512632