Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1005 273 2e-68 >seq1005 Length=21531 Score = 273 bits (302), Expect = 2e-68 Identities = 616/918 (67%), Gaps = 17/918 (2%) Strand=Plus/Plus Query 4257 TTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTT 4316 || ||||| || || || ||| || ||||| || |||||||| | | ||||| | Sbjct 9033 TTCTGGTAATCTGAAACCTTCTTCTCAAAGAAGTTGGTTTTGCCCTGCATTGAAATCATA 9092 Query 4317 TCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTT-TTCACACTTTAGAGCTACAAG 4375 |||||||| || || || |||| |||||| ||||| |||| || || | || || Sbjct 9093 TCCATAAAGCTGAATGGGTTGGTTGTGTTGTAGTGTTTGTTCA-ACCCAAGTTCAACTAG 9151 Query 4376 CAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAA 4435 || || || || |||||||| || || || | |||||| | ||| |||||||| | Sbjct 9152 CAGTCTATCGGCAACAAATTCAATGTATTGACACATGAGCACTTGGTTCATTCCAATAAG 9211 Query 4436 TCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTAT 4495 || || | || | ||| |||||||||||||| || | ||||||||||||| || Sbjct 9212 CGAGACTGGCAATGCATCTGTTAAAAACTCTTGTTCAATGCTAACGGCTTCTGTGACAAT 9271 Query 4496 ATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAA 4555 ||||| || | |||||||| || | ||| | |||||| | ||| |||| Sbjct 9272 GCTCAAGATTTTTTCCTCTGATGGTTTTCTTTGCAGGTACCTAAACAACAGACATCCAAA 9331 Query 4556 ATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCAT 4615 ||| || | || ||||| || | || |||||||| || || || | || ||||| Sbjct 9332 ATCTGTGTGAAGGCCCTCGTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGCCTGGCAT 9391 Query 4616 TAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTC 4675 | ||||| || || | ||| || || || ||||| || || ||||| || | || || Sbjct 9392 GAGCCCTCTTTTCTTCAACCAGAAGATGGCAGCAAAGGAGCCTGAAAAAAAGACACCCTC 9451 Query 4676 TACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGG---CTTTGTCTTTAATCCA 4732 | | || || || | | || || | |||||| | || |||| ||||| Sbjct 9452 GATTACAGCGAATGCAGCAAGACGCTCTCCAA---AGCTGGCCTCCTTATCTTCTATCCA 9508 Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA 4792 |||||||||||| | ||||| | | || ||||| | | | ||||| || | Sbjct 9509 TTTTAATGCCCATTGGGCTTTGCGTCTGATACAGGGAATGTTTTCAACTGCGTTGAAAAG 9568 Query 4793 TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGA 4852 | || ||||| | || | ||| || |||||||| | || ||||||||| Sbjct 9569 GTAGCTCTTTTCTGCTTCATCCTTAATGTATGTGTCTATCAAGAGTGAGTACATTTCACT 9628 Query 4853 ATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAAC 4912 || ||||| || || ||| || |||||||| |||| | ||||||| || ||||| Sbjct 9629 GTGGATATTCTCCATCATAATTTGGAATCCGTAGAAGCTACGTGCTTCTGGTATCTGAAC 9688 Query 4913 TTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAA 4972 || |||| ||| | || | ||||| || ||||| ||||| |||||||||||| Sbjct 9689 CTCTTTACCAAAGTTAAAAACAAGATTTTCATTCACTATTCCGTCTGAGGCTGCAAAAAA 9748 Query 4973 CGCCAAAACATGAGATATAAAGTA-CTGT--TCGTCAGGCTTAAGT---TTTTTCCAGTG 5026 |||| || || ||||| || || | | |||| || ||| |||| |||||| Sbjct 9749 GGCCAGAATGTGTTTGATAAAATATCTTTCATTGTCA---TTGAGTTTGTTTTCCCAGTG 9805 Query 5027 GGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTT 5086 | ||| | | || |||||| ||||| ||||||| ||||| ||||| || ||||| Sbjct 9806 CTCAATATCATGCGCTAGATCAACCTCTTCGGCAGTCCAGAACGATGCTTCGGCCTTTTT 9865 Query 5087 GTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCTGTTGTCGTTAGG 5146 |||||| |||||| |||| || | || |||| || |||||||||||| ||| || Sbjct 9866 GTACATGTTCCAAATCTCAGTGTATTTGATTGGAAACATCACAAATCTGTTGGGGTTTGG 9925 Query 5147 TGTAAGAAGCGGTTCTTG 5164 | |||||| ||| || Sbjct 9926 CTTGAGAAGCTCTTCCTG 9943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427039430080682