Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1005 244 2e-59 seq1894 178 2e-39 seq732 178 2e-39 >seq1005 Length=21531 Score = 244 bits (270), Expect = 2e-59 Identities = 590/881 (67%), Gaps = 28/881 (3%) Strand=Plus/Plus Query 46360 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATTA 46419 ||||| || || || |||||||| | || ||| || | |||||||| || || || Sbjct 9054 TTCTCAAAGAAGTTGGTTTTGCCCTGCATTGAAATCATATCCATAAAGCTGAATGGGTTG 9113 Query 46420 GTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCT 46479 || || || ||| || || || | ||| | ||||||||| ||||| ||||| Sbjct 9114 GTTGTGTTGTAGTGTTTGTTCAACCCAAGTTCAACTAGCAGTCTATCGGCAACAAATTCA 9173 Query 46480 ATATACGTTTTCATCATTT-CACAA--TTCATTCCTATGAGTTTGACCGGTAGAGCCTCC 46536 || || || || ||| ||| |||||||| || || ||| || | || || Sbjct 9174 ATGTA--TTGACA-CATGAGCACTTGGTTCATTCCAATAAGCGAGACTGGCAATGCATCT 9230 Query 46537 GTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGTT----ACTGTTTC 46592 || | ||||||||||||||| | || || || | | | ||| | | | |||| Sbjct 9231 GTTAAAAACTCTTGTTCAATGCTAACGGCTTCTGTGA----CAATGCTCAAGATTTTTTC 9286 Query 46593 CTCACTTGGTGGATGCATCAAATGTT--TAAACATTAAACATGCAAAATCACAATGAAGG 46650 ||| |||| | | | | || |||||| | |||| ||||||| |||||| Sbjct 9287 CTCTGATGGTT--TTCTTTGCAGGTACCTAAACAACAGACATCCAAAATCTGTGTGAAGG 9344 Query 46651 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTT 46710 || || || |||| || | |||||| || ||||| || || ||||| || || | || Sbjct 9345 CCCTCGTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGCCTGGCATGAGCCCTCTTTTC 9404 Query 46711 TTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAAT 46770 || | ||| || || || || || || || ||||| || | || || | | |||||| Sbjct 9405 TTCAACCAGAAGATGGCAGCAAAGGAGCCTGAAAAAAAGACACCCTCGATTACAGCGAAT 9464 Query 46771 GCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCTTTGAGCCCAATCA 46827 || |||| | |||||| | ||||| || |||| ||||| || ||||| | Sbjct 9465 GCAGCAAGACGCTCTCCAAAGCTGGCCTCCTTATCTTCTATCCATTTTAATGCCCATTGG 9524 Query 46828 GCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCA 46887 || || | | ||| || || |||| | || || || || || | ||||| | Sbjct 9525 GCTTTGCGTCTGATACAGGGAATGTTTTCAACTGCGTTGAAAAGGTAGCTCTTTTCTGCT 9584 Query 46888 CTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATA 46947 ||| |||| ||||| ||||| || || |||||||| || || || || || Sbjct 9585 TCATCCTTAATGTATGTGTCTATCAAGAGTGAGTACATTTCACTGTGGATATTCTCCATC 9644 Query 46948 GCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGT 47007 || || |||||||| || | | |||||| | ||||| |||||| ||| ||| || Sbjct 9645 ATAATTTGGAATCCGTAGAAGCTACGTGCTTCTGGTATCTGAACCTCTTTACCAAA--GT 9702 Query 47008 TCAGA-CAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTT 47065 | | | ||| ||| |||||||||||||| || || |||||||| |||| | |||| Sbjct 9703 TAAAAACAAGATTTTCATTCACTATTCCGTCTGAGGCTGCAAAAAAGGCCAGAATGTGTT 9762 Query 47066 TAATAAAATATTTTTCATCGGTAGTCAGTTTATT---CCAGTCATTGATATCTTTTGATA 47122 | ||||||||| |||||| | | | ||||| || ||||| | ||||| | | || Sbjct 9763 TGATAAAATATCTTTCATTGTCATTGAGTTTGTTTTCCCAGTGCTCAATATCATGCGCTA 9822 Query 47123 TATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATAT 47182 ||| || ||||| || |||||||| || || || || ||||| ||||| ||||| || | Sbjct 9823 GATCAACCTCTTCGGCAGTCCAGAACGATGCTTCGGCCTTTTTGTACATGTTCCAAATCT 9882 Query 47183 CACGATATTGGATCGGAAAAATAACAAATCTATTTGGATTT 47223 || |||| ||| ||||| || |||||||| || || ||| Sbjct 9883 CAGTGTATTTGATTGGAAACATCACAAATCTGTTGGGGTTT 9923 >seq1894 Length=33155 Score = 178 bits (196), Expect = 2e-39 Identities = 610/947 (64%), Gaps = 13/947 (1%) Strand=Plus/Plus Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG---CATTGGCATATTGTAT 76326 ||| ||||| ||||| | |||||| || || || || | || || || |||| | Sbjct 22239 AAGTGCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTG---TATTCCAC 22295 Query 76327 TATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTT 76386 ||||||||| || | || || | ||| || || || || || || ||||| ||| | Sbjct 22296 TATCTCCGTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCT 22355 Query 76387 GTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446 ||| || | || || || | | | || || || ||||| || ||||| || | ||| Sbjct 22356 GTTGCACGCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAAT 22415 Query 76447 AGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTC----TCTCTTT-CA 76501 | | ||| | | |||| || | | ||| | || || | | ||| || Sbjct 22416 TGCATACCACAGTTGTTGAGCTGGTACTCTC--TTTCTGGCGAGTCCTGGTGTATTTTCA 22473 Query 76502 TATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCA 76561 |||| ||| || | | ||||| ||||||||||| || || | | || ||| Sbjct 22474 TATTTTGTGTACAGCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCTCA 22533 Query 76562 TTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGT 76621 | || || | | ||||| || || | |||| ||| || ||||| || ||||| || Sbjct 22534 TGTGGGCAAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGA 22593 Query 76622 ATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTA 76681 ||||| | || || | ||| || | | ||||| || || |||||| || Sbjct 22594 ATCCACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTC 22653 Query 76682 AGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCC 76741 ||| ||||| || | | ||| | |||||||| || | |||||| || | |||| Sbjct 22654 AGACTAAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCT 22713 Query 76742 GGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATT 76801 |||| || || || ||||| || | |||||||||||| | || | || | || |||| Sbjct 22714 GGTCTCTTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATT 22773 Query 76802 GGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATA 76861 || | | || |||||||| ||||||||||| | ||| ||| ||| || | || Sbjct 22774 GGTACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATG 22833 Query 76862 TTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAAT 76921 || | | | || ||||| ||||| ||| || || | ||||| | || | | Sbjct 22834 TTGTGTACACTCAATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGT 22893 Query 76922 GTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATT 76981 || |||||||| |||||||| |||||||| |||| || | ||| || || | | Sbjct 22894 GTATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGT 22953 Query 76982 TGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCA 77041 || | | ||||| | ||||| | ||| || |||||||| || || | Sbjct 22954 TGTGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGC 23013 Query 77042 GAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCG 77101 || | | || |||||||| || |||| || || || | || ||||| | | | Sbjct 23014 GACATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGACTG 23073 Query 77102 ACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTAT 77161 || | |||||| | || ||| |||| ||||| || |||| | ||||||||||| Sbjct 23074 ACTCTCATCAAAAGATACTGTGGTCTCTCTACCACTTTGCCGTTTACTCTCAACAAGTAT 23133 Query 77162 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 77208 || || | ||||| ||||| ||||||||||| ||| ||||| Sbjct 23134 GAGCGCTCGAGTGTTTTGAAACCGAAATAGTTGTACCCAAAATCTCT 23180 >seq732 Length=14862 Score = 178 bits (196), Expect = 2e-39 Identities = 610/947 (64%), Gaps = 13/947 (1%) Strand=Plus/Plus Query 76270 AAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAG---CATTGGCATATTGTAT 76326 ||| ||||| ||||| | |||||| || || || || | || || || |||| | Sbjct 8956 AAGTGCTATTGATGCCAAATTACACACAGCCACTTCGTCAGGTGCAGTG---TATTCCAC 9012 Query 76327 TATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTT 76386 ||||||||| || | || || | ||| || || || || || || ||||| ||| | Sbjct 9013 TATCTCCGTACACAAGTTGCTGCTCTTTATTGTGCCCAGGTTCTGCTGGTTTGACTTGCT 9072 Query 76387 GTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAAT 76446 ||| || | || || || | | | || || || ||||| || ||||| || | ||| Sbjct 9073 GTTGCACGCATCTTTGTACAACATGTATGGCGTGCCTGTTTCTATTTGTGAATCTAAAAT 9132 Query 76447 AGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTC----TCTCTTT-CA 76501 | | ||| | | |||| || | | ||| | || || | | ||| || Sbjct 9133 TGCATACCACAGTTGTTGAGCTGGTACTCTC--TTTCTGGCGAGTCCTGGTGTATTTTCA 9190 Query 76502 TATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCA 76561 |||| ||| || | | ||||| ||||||||||| || || | | || ||| Sbjct 9191 TATTTTGTGTACAGCTTCTCAAACTCATCTCCCCACACCTCTGAGAGATTTGGCGCCTCA 9250 Query 76562 TTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGT 76621 | || || | | ||||| || || | |||| ||| || ||||| || ||||| || Sbjct 9251 TGTGGGCAAAATAGAGACCATTCTCCGTTTTCCAAAACTCGCTTCATGAACAGATCGGGA 9310 Query 76622 ATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTA 76681 ||||| | || || | ||| || | | ||||| || || |||||| || Sbjct 9311 ATCCACATTCCATAGAACAAATCACGTGCGCGGTTCTCTTCCTTACCGTGATTCTTCTTC 9370 Query 76682 AGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCC 76741 ||| ||||| || | | ||| | |||||||| || | |||||| || | |||| Sbjct 9371 AGACTAAGGAAATCAAACACATCTGCGTGCCATGGCTCCAAATATATAGCAAATGCACCT 9430 Query 76742 GGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATT 76801 |||| || || || ||||| || | |||||||||||| | || | || | || |||| Sbjct 9431 GGTCTCTTGTTTCCACCCTGGTCAACATATCTGGCAGTCTGGTTGAATACACGCAGCATT 9490 Query 76802 GGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATA 76861 || | | || |||||||| ||||||||||| | ||| ||| ||| || | || Sbjct 9491 GGTACTACTCCATTAGATGTTCCATTTGTTCCTGCAATGTAAGATCCTGTGGCTCTGATG 9550 Query 76862 TTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAAT 76921 || | | | || ||||| ||||| ||| || || | ||||| | || | | Sbjct 9551 TTGTGTACACTCAATCCAATTCCACCTGCTGATTTTGATATCATGGCACACTGCTTTAGT 9610 Query 76922 GTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATT 76981 || |||||||| |||||||| |||||||| |||| || | ||| || || | | Sbjct 9611 GTATCATAGATACCCTCTATGCTATCATCACTCATTGCCAGCAAAAAGCACGATGAGAGT 9670 Query 76982 TGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCA 77041 || | | ||||| | ||||| | ||| || |||||||| || || | Sbjct 9671 TGTGGCCGGTTTGTTCCCGAGTTAAATAGTGTTGGTGATGCATGTGTAAATAGCCGCTGC 9730 Query 77042 GAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCG 77101 || | | || |||||||| || |||| || || || | || ||||| | | | Sbjct 9731 GACATCATGTTATATGTTTCTATTGCTGCCTCAATGTCTTCTCCGTGTATTCCAAGACTG 9790 Query 77102 ACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTAT 77161 || | |||||| | || ||| |||| ||||| || |||| | ||||||||||| Sbjct 9791 ACTCTCATCAAAAGATACTGTGGTCTCTCTACCACTTTGCCGTTTACTCTCAACAAGTAT 9850 Query 77162 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCT 77208 || || | ||||| ||||| ||||||||||| ||| ||||| Sbjct 9851 GAGCGCTCGAGTGTTTTGAAACCGAAATAGTTGTACCCAAAATCTCT 9897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712916986577280