Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq492 118 2e-21 seq845 93.3 1e-13 seq462 93.3 1e-13 >seq492 Length=46864 Score = 118 bits (130), Expect = 2e-21 Identities = 154/210 (73%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||||||||| |||||||| || || | | |||| |||||||| | Sbjct 26937 CAAG-TGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGGGTTCGTCCATCTTCAA 26995 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || |||||||| || | || ||||| | | ||||||||||| || || Sbjct 26996 GTTGCTTT--CCTGCGAAGATGAGACGTTGTTGGTCTGGTGGAATTCCTTCCTTATCCTG 27053 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||| || |||||| | || | | | ||||| ||| || || || ||||| || || Sbjct 27054 AATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTAATTGTCTT 27113 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || | ||| || ||||| | |||||| Sbjct 27114 GCCTGTCAAAGTTTTTACGAAAATCTGCAT 27143 Score = 114 bits (126), Expect = 3e-20 Identities = 155/213 (73%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||||||||||||||| |||||||| || || | | |||| |||||||| | Sbjct 27165 CAAG-TGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGGGTTCGTCCATCTTCAA 27223 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || ||||||||||| | || ||||| | | ||||||||||| || || Sbjct 27224 GTTGCTTT--CCTGCGAAGATAAGACGTTGTTGGTCTGGTGGAATTCCTTCCTTATCCTG 27281 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 ||| || |||||| | || | | | ||||| ||| || || || ||||| || || Sbjct 27282 AATCTTGGCTTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTAATTGTCTT 27341 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||| || | || || || || | |||||| || Sbjct 27342 GCCTGTCAAGGTTTTTACAAAAATCTGCATATT 27374 Score = 113 bits (124), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 151902 TGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GC 151959 ||||||||||||||||| |||||||| || || | | ||||| |||||||| || || Sbjct 26713 TGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGAAAGAGTTCGTCCATCTTCAAGTTGC 26772 Query 151960 TTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTT 152019 ||| || |||||||| || | || ||||| | | || |||||||| || || |||| Sbjct 26773 TTT--CCTGCGAAGATGAGACGTTGTTGGTCTGGTGGAATCCCTTCCTTGTCCTGGATTT 26830 Query 152020 TTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCG 152079 | ||||| | || | | | ||||| ||| || || || ||||| || ||||| | Sbjct 26831 TAGCCTTGACGTTTTCAATGGTATCTGAGGGCTCGACCTCGAGTGTAATTGTCTTGCCTG 26890 Query 152080 TGAGAGTCTTCACGAAGACCTGCAT 152104 | | ||| || ||||| | |||||| Sbjct 26891 TCAAAGTTTTTACGAAAATCTGCAT 26915 >seq845 Length=10035 Score = 93.3 bits (102), Expect = 1e-13 Identities = 151/214 (71%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||||||||| ||||||||||| || || | || || | ||||| || | Sbjct 5415 CAAG-TGCAAAGTAGACTCCTTTTGGATGTTATAGTCTGACAATGTACGACCATCCTCGA 5357 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || ||||| || | | || || || | | ||||||||||| || || Sbjct 5356 GTTGCTTT--CCTGCGAAAATCAATCGTTGTTGATCTGGTGGAATTCCTTCCTTGTCCTG 5299 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || ||| |||||| | || | | ||||| ||| || || || ||||| || || Sbjct 5298 GATCTTTGCCTTGACATTTTCAATAGTATCTGAGGGCTCAACCTCGAGGGTAATTGTCTT 5239 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108 || || || ||||| ||||||| ||||||| || Sbjct 5238 ACCGGTAAGTGTCTTTACGAAGATCTGCATTCTA 5205 >seq462 Length=10693 Score = 93.3 bits (102), Expect = 1e-13 Identities = 151/214 (71%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || | ||||||||| ||||||||||| || || | || || | ||||| || | Sbjct 5443 CAAG-TGCAAAGTAGACTCCTTTTGGATGTTATAGTCTGACAATGTACGACCATCCTCGA 5385 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| || ||||| || | | || || || | | ||||||||||| || || Sbjct 5384 GTTGCTTT--CCTGCGAAAATCAATCGTTGTTGATCTGGTGGAATTCCTTCCTTGTCCTG 5327 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || ||| |||||| | || | | ||||| ||| || || || ||||| || || Sbjct 5326 GATCTTTGCCTTGACATTTTCAATAGTATCTGAGGGCTCAACCTCGAGGGTAATTGTCTT 5267 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108 || || || ||||| ||||||| ||||||| || Sbjct 5266 ACCGGTAAGTGTCTTTACGAAGATCTGCATTCTA 5233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153791913375134