Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Zancudomyces_20culisetae_20[genbank_20GCA_5F001969505.1_202017-01- 25] 1,954 sequences; 28,700,372 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1005 178 1e-39 >seq1005 Length=21531 Score = 178 bits (196), Expect = 1e-39 Identities = 502/765 (66%), Gaps = 11/765 (1%) Strand=Plus/Plus Query 23338 AGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAGT 23397 || ||||| || ||||||||||| ||||||||||| | | | ||| || || || || Sbjct 9153 AGTCTATCGGCAACAAATTCAATGTATTGACACATGAGCACTTGGTTCATTCCAATAAGC 9212 Query 23398 TTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATTATT 23457 ||||| | ||||| ||| || || ||||||| ||| || ||| | | | Sbjct 9213 GAGACTGGCAATGCATCTGTTAAAAACTCTTGTTCAATGCTAACGGCTTCTGTGACAA-- 9270 Query 23458 TGAACAATAACTTCTTCACTAGGTGGATATTTT---AAATACTTAAACAATAAACATGCA 23514 || ||| | || | | || | ||| | | || | ||| ||||||| | |||| || Sbjct 9271 TGCTCAAGATTTTTTCCTCT-GATGGTTTTCTTTGCAGGTACCTAAACAACAGACATCCA 9329 Query 23515 AAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGC 23574 ||||| || ||||| || ||||||| || | ||| || || ||||| | |||||| Sbjct 9330 AAATCTGTGTGAAGGCCCTCGTCCCTACAGATAAGTTCGTTTGAGAATGTAAGGCCTGGC 9389 Query 23575 ATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCC 23634 || | |||| ||| || | ||| || || |||||||| || || ||||| || | |||| Sbjct 9390 ATGAGCCCTCTTTTCTTCAACCAGAAGATGGCAGCAAAGGAGCCTGAAAAAAAGACACCC 9449 Query 23635 TCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAt 23694 || | | || || || ||||||| ||||| | || | | ||| |||||| Sbjct 9450 TCGATTACAGCGAATGCAGCAAGACGCTCTCCAAAGCTGGCCTCCTTATCTTCTATCCAT 9509 Query 23695 ttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGA 23754 ||| || ||| | || || | | | ||| ||| |||||| ||| || || || Sbjct 9510 TTTAATGCCCATTGGGCTTTGCGTCTGATACAGGGAATGTTTTCAACTGCGTTGAAAAGG 9569 Query 23755 AAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAA 23814 | | |||||| | | ||| | || ||||| || || | | ||||||||| Sbjct 9570 TAGCTCTTTTCTGCTTCATCCTTAATGTATGTGTCTATCAAGAGTGAGTACATTTCACTG 9629 Query 23815 TGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACA 23874 || ||||| || || ||| || || || || || | | ||||| | | ||||| Sbjct 9630 TGGATATTCTCCATCATAATTTGGAATCCGTAGAAGCTACGTGCTTCTGGTATCTGAACC 9689 Query 23875 TCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAA 23934 || ||| ||| | | | | |||||| || || || || || || ||||| || Sbjct 9690 TCTTTACCAAAGTTAAAAACAAGATTTTCATTCACTATTCCGTCTGAGGCTGCAAAAAAG 9749 Query 23935 GCAAGAACATATTTTATAAAATGTCTTTCA---TCAGTTGA-TAATTTTTTCCAATCATT 23990 || |||| | ||| ||||||| ||||||| ||| |||| | |||| ||| | | Sbjct 9750 GCCAGAATGTGTTTGATAAAATATCTTTCATTGTCA-TTGAGTTTGTTTTCCCAGTGCTC 9808 Query 23991 AATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050 |||||| | | || |||||| || || | ||||| || ||| ||| || || Sbjct 9809 AATATCATGCGCTAGATCAACCTCTTCGGCAGTCCAGAACGATGCTTCGGCCTTTTTGTA 9868 Query 24051 CATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCT 24095 ||| |||||| ||| | | || |||||||| || || ||||| Sbjct 9869 CATGTTCCAAATCTCAGTGTATTTGATTGGAAACATCACAAATCT 9913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521475262655600