Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq162 127 4e-24 >seq162 Length=94999 Score = 127 bits (140), Expect = 4e-24 Identities = 319/471 (68%), Gaps = 13/471 (3%) Strand=Plus/Plus Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGT--T 230230 |||||| ||||||||||||| | | || |||||||| || | ||| | | | | Sbjct 12632 TTTGCCCAGCGTCTCGTCGCTTTTGCCGCCGTCGAAGGTAT-CT-TCTTCAGTGGTTCAT 12689 Query 230231 TCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACG 230290 || ||||||||| ||||| ||| ||| | ||||| ||||| | || |||| Sbjct 12690 TCGCCGCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAACG 12749 Query 230291 AGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA--A 230348 || ||||| || |||||||||||||| || | | || || | | |||| | Sbjct 12750 AGCTCATCTCCCGTGACGAGGGTCTCCA-CACCGACTTTGCCTGCCTCC-TCTTCAGCCA 12807 Query 230349 GCTCCAGAACAAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAA 230408 ||| | |||| | | || ||| | ||| || |||| || || ||| | Sbjct 12808 TCTCAACAACAGCCGAGCAAG-GAGGCCGTCGAAGCTGTCATCGTTGAGGCCGTTACGAT 12866 Query 230409 CGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGG-CATGAACGCTGAAC 230467 || |||||||| || || ||| | || || ||| | |||| ||| ||||| | | Sbjct 12867 TGAGCAGGAGTTCCTTACGGAGGCTCTCCCGTG-CGCTCTCTTGGGCATCAACGCCAAGC 12925 Query 230468 TTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGA 230527 | ||| || |||||||| ||||| ||||||||| | |||| || || || || || Sbjct 12926 TGATGAAGCAATACATCGAGTTCGTCGCCGACCGCCTGCTTGTGGCCCTCGGCAACAGGA 12985 Query 230528 AAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGG-AAG 230586 | || ||||||||| ||||||||| | || |||||| || | |||| || ||| Sbjct 12986 AGGTCTACAACTCTGCGAACCCCTTCGACTTCATGGAG-TCGATCAGCTTGGCTGGCAAG 13044 Query 230587 ACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||||| ||||| ||||||||| ||||| |||| | ||||||| ||| Sbjct 13045 ACCAACTTTTTCGAGAAGCGTGTCTCGGACTACCAGAAGGCTGGTGTCATG 13095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057818416011560