Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq162 116 4e-21 >seq162 Length=94999 Score = 116 bits (128), Expect = 4e-21 Identities = 272/408 (67%), Gaps = 2/408 (0%) Strand=Plus/Minus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | | ||| || ||||| || || |||| |||||||| || || ||| Sbjct 12771 CCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGACCACGCTTC 12712 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || |||||||| || ||| ||||| ||||| ||||||| ||||| Sbjct 12711 TTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAGATACCTTCGACGGCGGCAAAA 12652 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 |||| | || | ||| | || | || | || ||||| |||| ||| Sbjct 12651 GCGACGAGACGCTGGGCAAAGGTGGACTCGTCGTCCTCGATCCAGCGGATGGCCCAGTCG 12592 Query 17165 GCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA-ATTTCTCTTTTTCCTG 17223 || || | ||| ||||| || || || || || | || | || | | | || Sbjct 12591 GCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTCGAAGAGATAGGTGCGCTGCTTG 12532 Query 17224 TAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCAT 17283 | || | ||||| |||||||| || || ||| |||| ||||| ||||||||||| Sbjct 12531 G-GCTCCTTGATATAGGTATCGATCAGGAGAGAGTAGGTTTCCGAGTGAATGTTCTCCAT 12473 Query 17284 GGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCG 17343 |||||||| ||||| ||||| |||||||| | || || || || | ||| || Sbjct 12472 CATGATCTGAAAGCCGTAGAAGCAGCGGGCTTCGGGGATCTGCACCTCATTGCTGAAGCG 12413 Query 17344 TTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 | | || || ||||| ||||| ||||| |||||||| || || Sbjct 12412 CTGGACGAGGTTCTCGTTGACGATACCGTCAGAGGCGGCGAAGAAGGC 12365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542934640160