Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq91 125 8e-24 >seq91 Length=152461 Score = 125 bits (138), Expect = 8e-24 Identities = 348/541 (64%), Gaps = 52/541 (10%) Strand=Plus/Plus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||| |||||| | |||||||||| | ||| ||||||||||| |||| ||||| Sbjct 104270 AGCTGCCTCTTCAGCGCGTCCACGTGGTCCATGTACACGTGCGCGTCGCCCATCACGTGC 104329 Query 145732 ATGAAGTC-CCCGGGCTCGAGGCCCG-TGAGGTGGGCGACCATGTAGGTCAGCAGGGAGT 145789 |||| | ||||| || | |||| | | ||| || | ||| | ||||||| | || Sbjct 104330 GTGAACACTCCCGGTTTCAA--CCCGCTTACGTGCGCCAGCATCTTCGTCAGCAAAGCGT 104387 Query 145790 AGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGC 145849 | || |||||||| ||||| ||||| |||||||| | ||||||||||||||||||| Sbjct 104388 ACGACGCGATGTTGAACGGCACTCCCAGTCCCATGTCGCAGGAGCGCTGGTACAGCTGGC 104447 Query 145850 AGGAGAGCTCCCCGCCCGCC---------------------------------------- 145869 || | |||||| ||| | Sbjct 104448 AGTTCAACTCCCCTACCGGCTTCTCTCCTCCTTCCATAGTTGTGTTTTGTTTAGGATAAG 104507 Query 145870 --ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCG 145927 ||||||||||| | | || || |||||||| ||||| | ||||| Sbjct 104508 AAACGTAGAACTGCGCGAACATATGACACGGCGGCAGCGCCATCTTATTTAAATCCGCGA 104567 Query 145928 GGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCA 145987 |||||| || | || | | |||||| | || | |||||| || ||| | Sbjct 104568 CGTTCCACGCCGACAGTATAATCCTCCTATCGTACGGACTATTCTTGAGCTTATGTATAA 104627 Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047 ||| |||||| ||||| |||| |||| ||||| |||| | ||||||| || ||| Sbjct 104628 CCTCCGCGAGCTGATCCACTCCCTTCCCCGTATAATCCGTCTCGCAGTCCACATATTCGG 104687 Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107 | ||||| |||| ||||||||| |||||||| || || ||||| || || | || Sbjct 104688 CACCGAAATGCCGCCACTGGAAACCGTAGACCGGTCCGAGGTCGCC---TTCTTTACGCT 104744 Query 146108 CC---AGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGC 146164 || || ||| | ||||| | | ||||| |||||| ||||||| ||||| |||| Sbjct 104745 CCGTGAGGCCGATGGAGTCGAGGTATGCGCGGGAGCCGTTGCCGTCCCATATCTTCACGC 104804 Query 146165 C 146165 | Sbjct 104805 C 104805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073761104480