Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq346 93.3 4e-14 >seq346 Length=29424 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || || || | ||| || | ||||| ||| || ||||| || ||||| ||||||| Sbjct 4911 CCACCACGGAGGCGGAGAACGAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAG 4852 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 ||||| || | ||||| ||||| || |||||| | || || | |||||| ||| ||| Sbjct 4851 AGGGTGCGGCCATCCTCAAGCTGCTTTCCCGCAAAGATGAGACGCTGCTGATCCGGGGG- 4793 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||| || |||||| || || | | | | ||||| | ||| Sbjct 4792 ATACCT-CCTTATCCTGGATCTTCGCCTTGACGTTGTCAATCGTATCGGACGACTCAACC 4734 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 || | ||| ||||||||||| || | || ||||| || ||||||||| Sbjct 4733 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCATT 4686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422257079730992