Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq346 96.9 2e-15 seq249 86.0 4e-12 >seq346 Length=29424 Score = 96.9 bits (106), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || || || | |||| ||| ||||| ||||||||||| || || ||| | || Sbjct 4896 AGAACGAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 4837 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || || || ||||| |||||||| || |||| |||||| || Sbjct 4836 TCAAGCTGCTTTCCCGCAAAGATGAGACGCTGCTGATC--CGGGGGATACCTCCTTATCC 4779 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | |||| ||||| ||| || || || | |||||||| Sbjct 4778 TGGATCTTCGCCTTGACGTTGTCAATCGTATCGGACGACTCAACCTCAAGGGTGATGGTC 4719 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| ||||| || || || ||||| ||||| Sbjct 4718 TTGCCCGTGAGGGTCTTGACGAAGATTTGCAT 4687 Score = 96.9 bits (106), Expect = 2e-15 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || ||||| | || || ||||| | || ||| ||||| || ||||| || || Sbjct 5365 TCCACCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGA 5306 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || | |||| |||| |||||| || ||||| || || ||||||||||| ||| Sbjct 5305 GAGAGTCCTTCCGTCTTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCCGGGGG 5246 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | | |||||| || ||||| ||| | || | | || | |||| || || || Sbjct 5245 GATACCCTCCTTATCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAAC 5186 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||||||| || || || | ||| |||||||| |||||||| Sbjct 5185 CTCCAGCGTGATGGTCTTTCCAGTTAAAGTCTTCACAAA-ATCTGCAT 5139 >seq249 Length=58106 Score = 86.0 bits (94), Expect = 4e-12 Identities = 135/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 ||||| || ||||| |||||||||||| ||| | | || | |||||| || ||||| Sbjct 56498 TCTTT-TGGATGTTATAGTCGGACAGCGTGCGGCCATTTTCGAGCTGCTTTCCGGCGAAG 56440 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||||| || | | |||||||| ||||| ||| | || | Sbjct 56439 ATCAGACGCTGCTGGTCGAGCGGGATGTATTCCTTGTCTTGGATCTTGGCCTTGATATTG 56380 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 || | || | || || || || | ||||| || ||||| ||||| || || || Sbjct 56379 TTGATGGTGTCAGAGGACTCAACCTCGAGGGTGAT-GTCTTGCCCGTGAGGGTCTTGACG 56321 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 56320 AAGATCTGCAT 56310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070377774720