Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 1e-11 >seq2 Length=859439 Score = 86.0 bits (94), Expect = 1e-11 Identities = 166/245 (68%), Gaps = 0/245 (0%) Strand=Plus/Minus Query 94795 CCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATGCTA 94854 || |||||||| ||||| | ||| |||||| ||||| || ||||| ||||| || Sbjct 393821 CCGGCAGTCTTCGAGATCAATGCGCAGGTCTTAAGGGTATCGTAGATACCTTCAATACTG 393762 Query 94855 TCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTTCCACAATTA 94914 ||||| | | | | | |||||||||||| || || || | || || || Sbjct 393761 TCATCCTTCATGGCGACGAGGAAGCACGAGCTCAGCTGCGGCTGGGGGGTACCCGCGTTG 393702 Query 94915 AACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTCAATG 94974 ||||| || || ||||| ||||| || | | || |||||| || || || || || Sbjct 393701 AACAGCGTCGGCGAAGCGTGGGTGAAGAACTTGCTGCTCATGAGCTCGTACGTCTCGATC 393642 Query 94975 ACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATGTCCTGAGGG 95034 || | |||||| ||||| ||||| || || || ||||| ||||||| ||| || Sbjct 393641 ACCTTCTCGATGTCCTCGCCGTGGATGCCTACGGCGACGCGCATGATCATGTGCTGCGGC 393582 Query 95035 CGCTC 95039 | ||| Sbjct 393581 CTCTC 393577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578776233460