Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq162 159 4e-34 seq2 105 8e-18 >seq162 Length=94999 Score = 159 bits (176), Expect = 4e-34 Identities = 373/556 (67%), Gaps = 10/556 (2%) Strand=Plus/Minus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||| ||||||||||| | || | ||||| || || || || Sbjct 12792 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGG 12733 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| || |||||||| || ||||| || |||| |||||||| || |||||| Sbjct 12732 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAG 12673 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 33758 || ||||| || || ||||| || | || | || || | || || ||| | Sbjct 12672 ATACCTTCGACGGCGGCAAAAGCGACGAGACGCTGGGCAAAGGTGGACTCGTCGTCCTCG 12613 Query 33759 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 ||||| | || ||||| ||||||||||| || | || || || || || || || | Sbjct 12612 ATCCAGCGGATG-GCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTC 12554 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 ||||||||| | | || || || | ||| |||||||||| ||| || | Sbjct 12553 GAAGAGATAGGTGCGCTGCTTGGGCTCCTTGATATAGGTATCGATCAGGAGAGAGTAGGT 12494 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 |||||| |||||||| || || |||||||| |||||||| || | || |||| || Sbjct 12493 TTCCGAGTGAATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCTTCGGGGAT 12434 Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997 |||||| || | | || || | | | || || || || || || ||| ||| || Sbjct 12433 CTGCACCTCATTGCTGAAGCGCTGGACGAGGTTCTCGTTGACGATACCGTCAGAGGCGGC 12374 Query 33998 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAG---TTTATTCC 34053 || || || | || || ||||| || ||||| | || | || || |||| Sbjct 12373 GAAGAAGGCAAGGACGTGAGAGATAAAGTAGCGCTCGTCGTCGT-TCAGCCTGTTGTTCC 12315 Query 34054 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 34113 | || || ||| || || | ||| | |||||| | ||||| || |||||||| |||| Sbjct 12314 AGTCGCCGAGATCCTTGGAGAGATCGATTTCTTCGGCGGTCCAGAACGATGCCTCGGCCT 12255 Query 34114 TTTTATACATATTCCA 34129 | || ||||| | ||| Sbjct 12254 TCTTGTACATTTGCCA 12239 >seq2 Length=859439 Score = 105 bits (116), Expect = 8e-18 Identities = 153/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 62034 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 62093 |||| ||| | ||||||||||||| || || |||| | || |||| |||||||||| Sbjct 395344 TCCTGGTCGACAGTGAATTGAATGGCGGCAGAGGCGGCCATGGTGCGTAAATAGTACATT 395285 Query 62094 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 62153 ||||| || ||||| |||| ||||| || |||||| ||| ||||| | | Sbjct 395284 CCCGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATAGACGTAAGTTT-ACCCATGTT 395226 Query 62154 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62213 || ||| || ||||| |||| || || || || |||||||| || ||||||||| Sbjct 395225 GGGTCTTTAATGTGGATGTTCAGCGACTGGCTCTGGTCGATGAACGCGGACCTGTCTGCC 395166 Query 62214 GCCATTTTTATGATCGTCTTTTGTGCAATTTCCCA 62248 ||||| | ||||| ||||||| || ||||| Sbjct 395165 GCCATGTCGATGATTACTTTTTGTGAGATCTCCCA 395131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629814356439360