Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq162 179 5e-40 seq2 111 2e-19 >seq162 Length=94999 Score = 179 bits (198), Expect = 5e-40 Identities = 375/555 (68%), Gaps = 8/555 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||| ||||||||||| | || || |||||||| || || || Sbjct 12792 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGG 12733 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || |||||||| || ||||| || |||| || ||||| ||| |||||| Sbjct 12732 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAG 12673 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CGCTGTCATGT 50136 || ||||| || |||||||| || || || | || || | ||| || ||| | Sbjct 12672 ATACCTTCGACGGCGGCAAAAGCGACGAGACGCTGGGCAAAGGTGGACTCGTCGTCCTCG 12613 Query 50137 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 50195 ||||| | || ||||| ||||||||||| || | || || || || || || || | Sbjct 12612 ATCCAGCGGATG-GCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTC 12554 Query 50196 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 50255 ||||||||| | | || || || | ||| |||||||||| ||| || | Sbjct 12553 GAAGAGATAGGTGCGCTGCTTGGGCTCCTTGATATAGGTATCGATCAGGAGAGAGTAGGT 12494 Query 50256 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 50315 |||||| |||||||| || || |||||||| |||||||| || | || |||| || Sbjct 12493 TTCCGAGTGAATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCTTCGGGGAT 12434 Query 50316 CTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 |||||| || | | || || | | | || || || || || |||||| ||| || Sbjct 12433 CTGCACCTCATTGCTGAAGCGCTGGACGAGGTTCTCGTTGACGATACCGTCAGAGGCGGC 12374 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG---TTTATTCCA 50432 || || || | || || ||||| | |||| | | || || ||||| Sbjct 12373 GAAGAAGGCAAGGACGTGAGAGATAAAGTAGCGCTCGTCGTCGTTCAGCCTGTTGTTCCA 12314 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 || || ||| || || | ||| | |||||| | ||||| || |||||||| ||||| Sbjct 12313 GTCGCCGAGATCCTTGGAGAGATCGATTTCTTCGGCGGTCCAGAACGATGCCTCGGCCTT 12254 Query 50493 TTTATACATATTCCA 50507 || ||||| | ||| Sbjct 12253 CTTGTACATTTGCCA 12239 >seq2 Length=859439 Score = 111 bits (122), Expect = 2e-19 Identities = 243/356 (68%), Gaps = 6/356 (2%) Strand=Plus/Minus Query 79945 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCG 80004 ||||| || || || || | ||| || || || || || |||| || ||| || Sbjct 394101 TTCATGAACAGGTCGGGCACCCAGAGGGCGTAGAACAGGTCCCTGGCCCTGACCTCTTCC 394042 Query 80005 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 80064 || || |||||| || ||||||||| | | | || | |||||||| || | | Sbjct 394041 TTACCGTGGTTCTTTCGGAGGTCGAGGAACTCGAACACGTCCGCGTGCCACGGCTCGAGG 393982 Query 80065 TATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 80124 || || || | | | || || | |||||| || ||||| || | ||| || || ||||| Sbjct 393981 TAGATTGCGAAAGCACCGGGCCTTTTGTTGCCGCCCTGGTCGACGTACCTGGCCGTGTTG 393922 Query 80125 TTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAG 80184 || | || |||| ||| || || | ||||||||| |||||||||||||| | ||| || Sbjct 393921 TTGAACACCCTCAGCATCGGGATGAGACCATTGGAAGTACCATTGGTCCC-GCGATGTAC 393863 Query 80185 CTTCCACTGGCACGAATATT-ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGAT 80243 || | | ||| ||||| | ||| ||||| | | | || || | || ||||| Sbjct 393862 GAGCCCGTAGAACGGATATTGTGGACGTGA-AGACCGA-TACACCGGCAGTCTTCGAGAT 393805 Query 80244 TAATGCGCATCGTTTTAA-CGTATCATAGATGCCCTCTATGCTATCATCAATCATG 80298 |||||||| || |||| ||||| ||||| || || || || ||||| ||||| Sbjct 393804 CAATGCGCA-GGTCTTAAGGGTATCGTAGATACCTTCAATACTGTCATCCTTCATG 393750 Score = 109 bits (120), Expect = 8e-19 Identities = 154/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765 |||| ||| | ||||||||||||| || || |||| | || |||| |||||||||| Sbjct 395344 TCCTGGTCGACAGTGAATTGAATGGCGGCAGAGGCGGCCATGGTGCGTAAATAGTACATT 395285 Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825 ||||| || ||||| |||| |||||||| |||||| ||| ||||| | | Sbjct 395284 CCCGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATAGACGTAAGTTT-ACCCATGTT 395226 Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885 || ||| || ||||| |||| || || || || |||||||| || ||||||||| Sbjct 395225 GGGTCTTTAATGTGGATGTTCAGCGACTGGCTCTGGTCGATGAACGCGGACCTGTCTGCC 395166 Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCA 78920 ||||| | ||||| ||||||| || ||||| Sbjct 395165 GCCATGTCGATGATTACTTTTTGTGAGATCTCCCA 395131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718265100915680