Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq346 141 2e-28 >seq346 Length=29424 Score = 141 bits (156), Expect = 2e-28 Identities = 160/213 (75%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || ||||| ||||||||||| || ||||| ||||| || ||||| Sbjct 5350 AAGGACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAGAGAGTCCTTCCGTC 5291 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 ||| || || || ||||| || || || | ||| || || || || || || || ||||| Sbjct 5290 TTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATC 5231 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || ||||| || | ||| ||| || || ||||| || || || || Sbjct 5230 CTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCCAGCGTGATGGT 5171 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| ||||| | || || ||||| |||||||| Sbjct 5170 CTTTCCAGTTAAAGTCTTCACAAA-ATCTGCAT 5139 Score = 107 bits (118), Expect = 4e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || ||||| || ||||| || || ||||| | ||||| Sbjct 5123 AAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCGGACAGAGTCCGGCCGTC 5064 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || || || || || | ||| ||||| || || || ||||| || || Sbjct 5063 CTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCGGG-GGAATGCCTTCCTTGTC 5005 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||||||||| || || ||||| |||| || || | || ||||| || || ||||| Sbjct 5004 CTGAATCTTCGCCTTGACATTGTCTATCGTGTCAGAGGACTCAACCTCGAGCGTGATAGT 4945 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||| || ||||| || || || || || ||||| Sbjct 4944 CTTTCCCGTAAGCGTCTTGACGAA-ATTTGCAT 4913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151392322055696