Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq346 87.8 2e-12 >seq346 Length=29424 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/204 (71%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC-GTCCTCCAGCTG 48582 ||||| ||| ||||| ||||| |||||||||| | ||| || ||| |||||||| Sbjct 5340 TGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAGAGA-GTCCTTCCGTCTTCCAGCTG 5282 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 |||||| || | || | |||||||| ||| || | || ||||| ||| ||| || Sbjct 5281 CTTACCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATCCTGAATCTT 5222 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | | ||||| |||| |||||| ||| | || ||||| || || || Sbjct 5221 GGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCCAGCGTGATGGTCTTTCCAGT 5162 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 | ||| ||||| ||||||||||| Sbjct 5161 TAAAGTCTTCAC-AAAATCTGCAT 5139 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 ||||| ||| |||||| || ||||| ||||| | || || ||||||| |||||| Sbjct 5113 TGAAGGGTGGACTCCTTCTGGATGTTATAATCGGACAGAGTCCGGCCGTCCTCGAGCTGC 5054 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 |||||| || | || | ||||||||||| | || | | |||||||||| ||| ||| Sbjct 5053 TTACCGGCGAAGATGAGACGCTGCTGAT-CGGGGGAATGCCTTCCTTGTCCTGAATCTTC 4995 Query 48644 TGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTG 48703 ||||| | |||| || || | ||||| ||||| || || || || || || Sbjct 4994 GCCTTGACATTGTCTATCGTGTCAGAGGACTCAACCTCGAGCGTGATAGTCTTTCCCGTA 4935 Query 48704 AGAGTTTTCACAAAAATCTGCAT 48726 || || || || |||| ||||| Sbjct 4934 AGCGTCTTGAC-GAAATTTGCAT 4913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249084792412