Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq80 154 2e-33 seq66 80.6 4e-11 >seq80 Length=167547 Score = 154 bits (170), Expect = 2e-33 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| |||||||| ||||| || ||||||||||| ||||||||| |||| Sbjct 9762 AGGTATCACCAAGCCGGCTATCCGCCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTC 9703 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 | || |||| ||||| | |||| ||| |||||| ||||||| || ||| |||| Sbjct 9702 CGCCATGATCTACGAAGAAACCCGTGGTGTCCTGAAGACCTTCCTCGAGGGCGTCATCCG 9643 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG-TAAGACTGTCACCTCCATGGATATCG 16649 ||||| | ||| ||||| ||||| || || ||||||||||||||| | ||| | | Sbjct 9642 CGATGCCGTTACCTACACCGAACACGCCAAGCGCAAAGACTGTCACCTCCCTCGATGTTG 9583 Query 16650 TCTATGCATTGAAACGTCAAGGCCG 16674 |||| || | || || |||||||| Sbjct 9582 TCTACGCCCTCAAGCGCCAAGGCCG 9558 >seq66 Length=200430 Score = 80.6 bits (88), Expect = 4e-11 Identities = 71/86 (83%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCA-GCTATCCGTCGTCTGGCTCG 16506 ||||| ||||| ||||| || || ||||||||||| |||||||| ||||| || || Sbjct 194160 AGATC-CTTCGCACAAACATTCAGGGTATCACCAAGCCTTGCTATCCGCCGTCTCGCCCG 194218 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||||||||| ||||||||| |||||| Sbjct 194219 TCGTGGTGGTGTCAAGCGTATCTCTG 194244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074823305516