Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 178 3e-39 >seq2 Length=859439 Score = 178 bits (196), Expect = 3e-39 Identities = 622/943 (66%), Gaps = 30/943 (3%) Strand=Plus/Plus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTC-GTATCAATGGTGATATTGTTGA 363449 ||||| | ||||| | ||| |||||||| |||| | ||||| || | | | || Sbjct 393520 TTCGGCTTCAAGACCCTCGAGCGCTCCTACCT-TCTCCGCATCAACGGCGCCGTCGCCGA 393578 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | |||||||| ||| | ||||| || || | || ||||| || ||| | || Sbjct 393579 GAGGCCGCAGCACATGATCATGCGCGTCGCCGTAGGCATCCACGGCGAGGACATCGAGAA 393638 Query 363510 CGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTATTCACGCACGCCACGCCAACAA 363568 | ||| || || || |||| | || || || | ||||| ||||| |||| || Sbjct 393639 GGTGATCGAGACGTACGAGCTCATGAGCAGCAAGT-TCTTCACCCACGCTTCGCCGACGC 393697 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| ||| || || || | | || ||| || || ||||| || | ||||||| Sbjct 393698 TGTTCAACGCGGGTACCCCCCAGCCGCAGCTGAGCTCGTGCTTCCTCGTCGCCATGAAGG 393757 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 | || || || ||||||| || || ||||||| || || | || || |||| || Sbjct 393758 ATGACAGTATTGAAGGTATCTACGATACCCTTAAGACCTGCGCATTGATCTCGAAGACTG 393817 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCA 363748 | || | | | ||| | |||||||| | ||| | | | ||||| ||||| | Sbjct 393818 CCGGTGTA-TCGGTCTTCACGTCCACAATATCCGTTCTACGGGCTCGTACAT-CGCGGGA 393875 Query 363749 CAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGG 363807 | || |||| | ||||| || | || ||||| | ||||| |||| || || ||| Sbjct 393876 CCAATGG-TACTTCCAATGGTCTCATCCCGATGCTGAGGGTGTTCAACAACACGGCCAGG 393934 Query 363808 TACGTCGACCAGGGTGG-AGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 |||||||||||||| || | ||| || || || || || || || |||||||| Sbjct 393935 TACGTCGACCAGGGCGGCAACAAAAGGCCC-GGTGCTTTCGCAATCTACCTCGAGCCGTG 393993 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAAC-ACGGGAA--AAGAGGAATT 363923 || || || | || ||||| || || ||||| || ||| |||| || |||||| | Sbjct 393994 GCACGCGGACGTGTTCGAGTTCCTCGACCTCCGAAAGAACCACGGTAAGGAAGAGG---T 394050 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 | || | || |||||||| || || ||||| | |||| || |||||| | || || Sbjct 394051 CAGGGCCAGGGACCTGTTCTACGCCCTCTGGGTGCCCGACCTGTTCATGAAGAGGGTCGA 394110 Query 363984 GGCAGGTAAGA-ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTAT 364042 | ||| | | ||| || || ||||| |||| | | || ||||| ||||| | Sbjct 394111 G-CAGAACGGTGACTGGAGCCTGTTCTGCCCTAACGAGGCTACCGGCCTTTCGGATGTTT 394169 Query 364043 GGGGTGACGACTATGTT-GCTCTATAC--GAAAAGTATGAATCGGAGGGAAAGGCTCGTA 364099 || || || | | |||||| || | | | | | | | || || || | Sbjct 394170 ACGGCGAGGAGTTCGAGAGCTCTACACCCGCTACG-AGAAGACCGCCGGCCTCGCGCGCA 394228 Query 364100 AGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAA 364159 ||| | || |||||||| ||| |||||| |||| |||||| ||||| |||| Sbjct 394229 GGACCGTCAAGGCGCAGAAGCTG-GGTATGCCATTCTGGAGGCGCAGACCGAGACGGGAA 394287 Query 364160 CACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTA 364219 | || || ||| ||||||| || | |||||| ||| ||||||| || |||| || | Sbjct 394288 CCCCGTACATGCTGTACAAGGACGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGCA 394347 Query 364220 CAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGA 364276 | || || ||||| ||||| || || ||||| | || ||| |||| ||||| ||| Sbjct 394348 CGAT-CA--AGAGCTCTAACCTGTGCACGGAGATCGTCGAGTACTCCGC-CCCGATGAGG 394403 Query 364277 CTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT 364319 ||||| || ||||| ||||||||||| || ||| |||| || Sbjct 394404 TAGCCGTGTGCAACCTCGCGTCGATCGCCCTGCCGACGTTCGT 394446 Score = 147 bits (162), Expect = 6e-30 Identities = 302/441 (68%), Gaps = 10/441 (2%) Strand=Plus/Plus Query 364720 AAGCATGGTACTCGCAACTCC--CTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCAC 364777 ||||| || | ||||||||| ||||| ||||||||||| || ||||| || | | Sbjct 394850 AAGCACGGCATGCGCAACTCCTCCTCGTC---GCGCCCATGCCTACCGCTTCCACGTCCC 394906 Query 364778 AGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGG 364837 |||||||||| |||||||||||||||||| | || ||| | || || ||||| | Sbjct 394907 AGATCCTCGGTTTCAACGAGTGCTTCGAACCCTACACGTCCAACATCTACTCCCGCCGCG 394966 Query 364838 TTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCG 364897 | || |||| ||||| | | | || || || || | ||||| || ||| | | Sbjct 394967 TCCTCGCCGGCGAATTCCAGATCGTAAACCCGTGGCTGCTAAAGGACCTCGTCGAACTGG 395026 Query 364898 GGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACA 364957 | || ||| | || | |||||||||| |||||||||| || ||||| | ||||||| Sbjct 395027 GTCTCTGGAGCGATAACATGAAGAACCGCATCATCGCCGACAACGGTTCCATCCAGAACA 395086 Query 364958 TTCC-AGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATG 365016 | || | || ||| | || | || | | ||||| ||||| ||||| || | || Sbjct 395087 TCCCGAACATACCCA-AGGACATAAAATCGCTGTACAAGACCGTCTGGGAGATCT-CACA 395144 Query 365017 CGAACT-CTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTT 365075 || | |||| || |||||||| || | || || ||| |||||||||||| | Sbjct 395145 AAAAGTAATCATCGACATGGCGGCAGACAGGTCCGCGTTCATCGACCAGAGCCAGTCGCT 395204 Query 365076 TAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTG 365135 ||| | ||| | | ||||| | | || ||||| || ||||| |||||||| || Sbjct 395205 GAACATCCACATTAAAGACCCAACAT-GGGTAAACTTACGTCTATGCACTTCTACGGCTG 395263 Query 365136 GAAATCCGGTCTTAAGACAGG 365156 ||| ||||| ||||| || Sbjct 395264 GAAGAAGGGTCTCAAGACGGG 395284 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346719922184