Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq162 165 1e-35 seq2 122 1e-22 >seq162 Length=94999 Score = 165 bits (182), Expect = 1e-35 Identities = 374/556 (67%), Gaps = 10/556 (2%) Strand=Plus/Minus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| ||||||||||| | || | |||||||| || || || Sbjct 12792 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGG 12733 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| || |||||||| || ||||| || |||| || ||||| ||| ||||| Sbjct 12732 CCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAG 12673 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 32837 || ||||| || || ||||| || | || | || || | || || ||| | Sbjct 12672 ATACCTTCGACGGCGGCAAAAGCGACGAGACGCTGGGCAAAGGTGGACTCGTCGTCCTCG 12613 Query 32838 ATCCA-CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATT 32896 ||||| | || ||||| ||||||||||| || | || || || ||||| ||||| | Sbjct 12612 ATCCAGCGGATG-GCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTC 12554 Query 32897 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACAT 32956 ||||||||| | | || || || | ||| ||||| |||| ||| || | Sbjct 12553 GAAGAGATAGGTGCGCTGCTTGGGCTCCTTGATATAGGTATCGATCAGGAGAGAGTAGGT 12494 Query 32957 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAAT 33016 |||||| |||||||| || || || ||||| ||||||||||| | || |||| || Sbjct 12493 TTCCGAGTGAATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCTTCGGGGAT 12434 Query 33017 CTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 33076 ||| || || | | || || | | | || || || || || |||||| ||| || Sbjct 12433 CTGCACCTCATTGCTGAAGCGCTGGACGAGGTTCTCGTTGACGATACCGTCAGAGGCGGC 12374 Query 33077 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAG---TTTATTCC 33132 || || || | || || ||||| || ||||| | || | || || |||| Sbjct 12373 GAAGAAGGCAAGGACGTGAGAGATAAAGTAGCGCTCGTCGTCGT-TCAGCCTGTTGTTCC 12315 Query 33133 AATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33192 | || || ||| || || | ||| | |||||| | ||||| || |||||||| |||| Sbjct 12314 AGTCGCCGAGATCCTTGGAGAGATCGATTTCTTCGGCGGTCCAGAACGATGCCTCGGCCT 12255 Query 33193 TTTTATACATATTCCA 33208 | || ||||| | ||| Sbjct 12254 TCTTGTACATTTGCCA 12239 >seq2 Length=859439 Score = 122 bits (134), Expect = 1e-22 Identities = 204/287 (71%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 63146 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63205 |||||| || ||||||||| | | | || | |||||||| || | ||| || || Sbjct 394032 TTCTTTCGGAGGTCGAGGAACTCGAACACGTCCGCGTGCCACGGCTCGAGGTAGATTGCG 393973 Query 63206 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63265 | | | || |||| |||||| || ||||| || | ||| || || ||||| || | || Sbjct 393972 AAAGCACCGGGCCTTTTGTTGCCGCCCTGGTCGACGTACCTGGCCGTGTTGTTGAACACC 393913 Query 63266 CTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTG 63325 |||| ||| || || | ||||||||| |||||||||||||| | ||| || || | Sbjct 393912 CTCAGCATCGGGATGAGACCATTGGAAGTACCATTGGTCCC-GCGATGTACGAGCCCGTA 393854 Query 63326 GCACGAATATT-ACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA 63384 | ||| ||||| | ||| ||||| | | | || || | || ||||| |||||||| Sbjct 393853 GAACGGATATTGTGGACGTGA-AGACCGA-TACACCGGCAGTCTTCGAGATCAATGCGCA 393796 Query 63385 TCGTTTTAA-CGTATCATAGATGCCCTCTATACTATCATCCATCATG 63430 || |||| ||||| ||||| || || ||||| |||||| ||||| Sbjct 393795 -GGTCTTAAGGGTATCGTAGATACCTTCAATACTGTCATCCTTCATG 393750 Score = 100 bits (110), Expect = 4e-16 Identities = 152/215 (71%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 61838 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 61897 |||| ||| | ||||||||||||| || || |||| | || |||| |||||||||| Sbjct 395344 TCCTGGTCGACAGTGAATTGAATGGCGGCAGAGGCGGCCATGGTGCGTAAATAGTACATT 395285 Query 61898 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 61957 ||||| || ||||| |||| ||||| || |||||| ||| ||||| | | Sbjct 395284 CCCGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATAGACGTAAGTTT-ACCCATGTT 395226 Query 61958 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 62017 || ||| || ||||| |||| || || || || |||||||| || ||||||||| Sbjct 395225 GGGTCTTTAATGTGGATGTTCAGCGACTGGCTCTGGTCGATGAACGCGGACCTGTCTGCC 395166 Query 62018 GCCATTTTTATAATCGTCTTTTGTGGAATTTCCCA 62052 ||||| | || || ||||||| || ||||| Sbjct 395165 GCCATGTCGATGATTACTTTTTGTGAGATCTCCCA 395131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633628736795200