Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq346 91.5 1e-13 >seq346 Length=29424 Score = 91.5 bits (100), Expect = 1e-13 Identities = 145/204 (71%), Gaps = 3/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||||| || || || ||||||| | || || ||||| || Sbjct 5139 ATGCAGAT-TTTGTGAAGACTTTAACTGGAAAGACCATCACGCTGGAGGTTGAGTCTTCC 5197 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | || | ||| || || || || || || || ||||| Sbjct 5198 GACACCATCGACAATGTGAAGGCCAAGATTCAG-GATAAGGAGGGTATCCCCCCGGACCA 5256 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| |||| || || || || || | ||||| | | ||| | |||||||| Sbjct 5257 GCAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAAGACGGAAGGACTCTCTCTGATTACAA 5316 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 |||||| || |||||||| || || Sbjct 5317 TATTCAGAAGGAATCCACCCTTCA 5340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325824151780