Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq346 96.9 3e-15 >seq346 Length=29424 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || |||||||| || || || |||| || || || || | || Sbjct 5139 ATGCAGATTTT-GTGAAGACTTTAACTGGAAAGACCATCACGCTGGAGGTTGAGTCTTCC 5197 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || ||||| || ||||||||||| || || || || Sbjct 5198 GACACCATCGACAATGTGAAGGCCAAGATTCAGGATAAGGAGGGTATCCCCCCGGACCAG 5257 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || || || ||| | || || | || |||| |||||||| Sbjct 5258 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAAGACGGAAGGACTCTCTCTGATTACAAT 5317 Query 22399 ATTCAAAAAGAATCCACC 22416 ||||| || ||||||||| Sbjct 5318 ATTCAGAAGGAATCCACC 5335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725892440780