Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq346 168 1e-36 seq249 156 8e-33 seq162 134 3e-26 seq4 114 2e-20 seq269 98.7 2e-15 seq3 98.7 2e-15 >seq346 Length=29424 Score = 168 bits (186), Expect = 1e-36 Identities = 175/227 (77%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || |||||||| || ||||||||||||||||| Sbjct 5137 CCGCCACGGAGACGAAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCGGAC 5078 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || |||| || || || | |||||| |||||||| ||||| | || || ||||| ||| Sbjct 5077 AGAGTCCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCGGG-GGA 5019 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||||||||| |||||||| |||||||| || || ||||| | || || || Sbjct 5018 ATGCCTTCCTTGTCCTGAATCTTCGCCTTGACATTGTCTATCGTGTCAGAGGACTCAACC 4959 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || |||||||| || ||||||||||| || ||||| Sbjct 4958 TCGAGCGTGATAGTCTTTCCCGTAAGCGTCTTGACGAA-ATTTGCAT 4913 Score = 141 bits (156), Expect = 2e-28 Identities = 173/235 (74%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | ||| || || || || | || | ||| || ||||| || || || || || | Sbjct 5372 TTTACTGTCCACCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCCTTCTGAATATTGT 5313 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||| ||||| ||||| || ||||| | |||||| || ||||| || || | || |||| Sbjct 5312 AATCAGAGAGAGTCCTTCCGTCTTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGT 5253 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || || || || ||||| || |||||||| ||||| || ||||||||||| | | Sbjct 5252 CCGGGGGGATACCCTCCTTATCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAG 5193 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || || |||| |||||||| ||||| || | ||||| || || |||||||| Sbjct 5192 ACTCAACCTCCAGCGTGATGGTCTTTCCAGTTAAAGTCTTCAC-AAAATCTGCAT 5139 Score = 129 bits (142), Expect = 1e-24 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | || || || || || || |||||||| || || ||| Sbjct 4911 CCACCACGGAGGCGGAGAACGAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAG 4852 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || ||||| | || || || || ||| Sbjct 4851 AGGGTGCGGCCATCCTCAAGCTGCTTTCCCGCAAAGATGAGACGCTGCTGATCCGGGGGA 4792 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 | ||| |||| || || ||||| ||||||||| || || || || | || || || Sbjct 4791 -TACCT-CCTTATCCTGGATCTTCGCCTTGACGTTGTCAATCGTATCGGACGACTCAACC 4734 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | ||||||||| || |||||||||||||||||||| || |||||| Sbjct 4733 TCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCATT 4686 Score = 96.9 bits (106), Expect = 6e-15 Identities = 105/136 (77%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | |||||| ||||| || || || | || |||||||| ||| | |||||| Sbjct 4504 CCATCTTCAAGCTGCTTTCCGGCAAAGATCAGACGCTGCTGGTCGGGAGGA-TCCCTTCC 4446 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| ||||| |||||||| ||||||||||| | ||||| || | |||| Sbjct 4445 TTGTCTTGGATCTTAGCCTTGACATTATCGATGGTGTCCGAGGATTCGACCT-CAAG--A 4389 Query 68424 ATGGTTTTTCCCGTGA 68439 |||| ||||| |||| Sbjct 4388 GTGGTCTTTCCGGTGA 4373 >seq249 Length=58106 Score = 156 bits (172), Expect = 8e-33 Identities = 172/225 (76%), Gaps = 3/225 (1%) Strand=Plus/Minus Query 68241 CGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTC 68300 || ||||| | || | ||| || || |||||||| |||||||||| ||||| || || Sbjct 56527 CGGAGGCGGATAACGAGGTGGAGGGTA-ACTCTTTT-GGATGTTATAGTCGGACAGCGTG 56470 Query 68301 CTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCT 68360 | |||| ||| | |||||| |||||||| || || | || |||||| | || ||| | Sbjct 56469 CGGCCATTTTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGCTGGTCGAGCGGGATGTAT 56410 Query 68361 TCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAG 68420 ||||||||||| ||||| ||||||| | ||||||||| | || || || || | | Sbjct 56409 TCCTTGTCTTGGATCTTGGCCTTGATATTGTTGATGGTGTCAGAGGACTCAACCTCGAGG 56350 Query 68421 GTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||| || || |||||||||||||||||||| ||||||||| || Sbjct 56349 GTGAT-GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATTTTG 56306 Score = 138 bits (152), Expect = 2e-27 Identities = 163/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTA-TAATCGGA 68293 || ||||| |||| | || | ||| || |||||||| || |||||||| || ||| | Sbjct 56743 CCACCGCGGAGGCAGAGGACGAGGTGGAGGGTGGACTCCTTCTGGATGTTTGTAGTCGAA 56684 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 || || | |||||||| | |||||| |||||||| || || | | | |||||| || Sbjct 56683 CAGCGTGCGGCCATCTTCGAGCTGCTTTCCGGCGAAGATCAGACGCTACTAGTCGGGCGG 56624 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||||||||| | | | |||||| ||||||| ||||| ||||| | || || || Sbjct 56623 GATGCCTTCCTCGCCCTAAATCTTAGCCTTGATACTGTCGATAGTGTCGGAAGACTCAAC 56564 Query 68414 TTCCAAGGTGATGGTTTTT-CCCGTGAGGGTCTTGACG 68450 || | ||||||||||||| | |||||||||||||||| Sbjct 56563 CTCGACGGTGATGGTTTTTACTCGTGAGGGTCTTGACG 56526 >seq162 Length=94999 Score = 134 bits (148), Expect = 3e-26 Identities = 549/861 (64%), Gaps = 16/861 (2%) Strand=Plus/Minus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| ||||| || || |||||| ||||||| |||||| | Sbjct 13095 CATGACACCAGCCTTCTGGTAGTCCGAGACACGCTTCTCGAAAAAGTTGGTCTTGCCAGC 13036 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 | | || |||||||||||| ||||||||| | | | | ||| || || Sbjct 13035 CAAGCTGATCGACTCCATGAAGTCGAAGGGGTTCGCAGAGTTGTAGACCTTCCTGTTGCC 12976 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | |||||| || |||||||||||||| || ||||||| | | ||| Sbjct 12975 GAGGGCCACAAGCAGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAGCTTGGCGTT 12916 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 ||||| | | ||| |||| || || || ||| |||| || | | || || Sbjct 12915 GATGCCCAAGAGAGCGCACGGGAGAGCCTCCGTAAGGAACTCCTGCTCAATCGTAACGGC 12856 Query 10175 TTCCTCGACGA-TGCTCTTTACCACGTCAAGGGACAGCTTGTTCTCGAGCTTCGAATACA 10233 || ||| || ||| | || | || | | || |||| | ||| | | | Sbjct 12855 CTCAACGATGACAGCT-TCGACGGCCTCCTTGCTCGGC-TGTTGTTGAGATGGCTGAAGA 12798 Query 10234 GGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAAC 10293 |||| |||| | |||||| |||||||| ||| ||||| ||||||||| || Sbjct 12797 GGAGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGG 12738 Query 10294 CCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGA 10353 ||| ||||||||||| || || || |||||||| |||||| ||| || || || Sbjct 12737 TCAGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGA 12678 Query 10354 ACAGAAGACCCTCCACGCACACCCAGGCGACGAGGCGCTCTGCGAAGGAGCGGTCG---- 10409 | | | ||| || ||| | | |||||||| |||| || |||| | ||| Sbjct 12677 AGAAGATACCTTCGACGGCGGCAAAAGCGACGAGACGCTGGGCAAAGGTGGACTCGTCGT 12618 Query 10410 -CGCGA---AAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGATCGTCTC 10465 | ||| | | || |||||| | |||||||| | | ||||| ||||| Sbjct 12617 CCTCGATCCAGCGGAT-----GGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTC 12563 Query 10466 GATAGCCTCGAAGAGCTTGTTACGCTCGGTCTCGTCCTCAATAAGAGCATCAAGGAGCAG 10525 |||||| |||||||| | | | |||| | |||| ||| | ||| | || || Sbjct 12562 GATAGCGTCGAAGAGATAGGTGCGCTGCTTGGGCTCCTTGATATAGGTATCGATCAGGAG 12503 Query 10526 GGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAACATACGTGC 10585 ||||| || ||| | | |||| | ||| | ||||||| || || Sbjct 12502 AGAGTAGGTTTCCGAGTGAATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGC 12443 Query 10586 CGAGGGGTCCGTGACTTCCTCGGCAAAGTTGTTGTTCAGGTTCTCCATCACCATGCCATC 10645 |||| | || || | | ||| | | |||||||| | || || || || Sbjct 12442 TTCGGGGATCTGCACCTCATTGCTGAAGCGCTGGACGAGGTTCTCGTTGACGATACCGTC 12383 Query 10646 GCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATCATCGTTCAGTTT 10705 | | || |||||| | |||| ||| ||| |||| |||||| || |||||||| | Sbjct 12382 AGAGGCGGCGAAGAAGGCAAGGACGTGAGAGATAAAGTAGCGCTCGTCGTCGTTCAGCCT 12323 Query 10706 TTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGTCCAGAAAGTGGC 10765 | |||||| | | ||||| | ||| | || || || |||||||||| | || Sbjct 12322 GTTGTTCCAGTCGCCGAGATCCTTGGAGAGATCGATTTCTTCGGCGGTCCAGAACGATGC 12263 Query 10766 AACGGCCTTCTTGTACATCTG 10786 |||||||||||||||| || Sbjct 12262 CTCGGCCTTCTTGTACATTTG 12242 >seq4 Length=583001 Score = 114 bits (126), Expect = 2e-20 Identities = 117/149 (79%), Gaps = 3/149 (2%) Strand=Plus/Plus Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 ||||| || | |||||| ||| |||| || || | || ||||| || ||| |||||||| Sbjct 25167 CCATCCTCAAGCTGCTTTCCG-CGAAGATCAGACGCTGCTGGTCCGGGGGA-TGCCTTCC 25224 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| || || |||||||| ||||||||||| | || || || || | |||| Sbjct 25225 TTGTCTTGGATTTTGGCCTTGACATTGTCGATGGTGTCGGAGGACTCGACCTCGAGGGTG 25284 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 ||||| || |||||||||||| ||||||| Sbjct 25285 ATGGTCTTGCCCGTGAGGGTC-TGACGAA 25312 >seq269 Length=51757 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/194 (72%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 ||||| || || ||||| || ||||| || || ||||| || || || | ||| || ||| Sbjct 21073 GTGGATTCCTTCTGGATATTGTAATCAGAAAGGGTCCTTCCGTCCTCAAGCTGTTTACCG 21014 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| ||||| | ||| |||||||| ||| | | || || || || ||||| | | | Sbjct 21013 GCGAAGATGAGACGTTGCTGGTCGGGGGGA-TACACTCATTATCCTGGATCTTAGACCTA 20955 Query 68385 ACG--GCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGG 68442 ||| |||| | |||| | || || || || | ||||| | |||||||| || | Sbjct 20954 ACGTTGCCT--ACCATGTCCGAGGACTCAACCTCGAGCGTGATAGCCTTTCCCGTAAGCG 20897 Query 68443 TCTTGACGAATATC 68456 |||||||||| ||| Sbjct 20896 TCTTGACGAAAATC 20883 >seq3 Length=759389 Score = 98.7 bits (108), Expect = 2e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 68277 TGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGT 68336 ||| |||| |||||||| || |||| || || | |||||| |||||||| ||||| Sbjct 395841 TGGGTGTTGTAATCGGACAGAGTCCGGCCGCTCTCGAGCTGCTTACCGGCGAAGATGAGA 395782 Query 68337 CTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATG 68396 | || | ||| ||||||||| |||||| ||| |||||||||||||||||| || || Sbjct 395781 CGCTGCTAGTCCGGTGGAATGTCTTCCTAGTCCTGAATCTTTGCCTTGACGTTGTCTATC 395722 Query 68397 GTGTCTG 68403 |||| || Sbjct 395721 GTGTTTG 395715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921617653644640