Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq162 168 8e-37 >seq162 Length=94999 Score = 168 bits (186), Expect = 8e-37 Identities = 538/824 (65%), Gaps = 38/824 (5%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||||||| || ||||||||||| ||||| ||||| || |||||||||| |||||| Sbjct 13077 GTAGTCCGAGACACGCTTCTCGAAAAAGTTGGTCTTGCCAGCCAAGCTGATCGACTCCAT 13018 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAAT-----TGTTGGCA----CCCCAATCTGTTT 125868 || || || |||||| ||||| | | ||||| | || ||| | Sbjct 13017 GAAGTCGAAGGGGTTCGCAGAGTTGTAGACCTTCCTGTTGCCGAGGGCCACAAGC----- 12963 Query 125869 GAGGAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGAT 125928 || || || | |||| |||| ||||| | |||| || | ||| || || | Sbjct 12962 ----AGGCGGTCGGCGACGAACTCGATGTATTGCTTCATCAGCTTGGCGTTGATGCCCAA 12907 Query 125929 GAGGTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCAC 125988 ||| || ||||| || ||| | |||| ||| |||||| ||||| || || Sbjct 12906 GAGAGCGCACGGGAGAGCCTCCGTAAGGAACTCCTGCTCAATCGTAACGGCCTCA---AC 12850 Query 125989 GATG---GCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC 126045 |||| || | | || ||| | || || ||| | | ||||||| Sbjct 12849 GATGACAGCTTCGACGGCCTCCTTGCTCGG-CTGTTGTTGAGATGGCTGAAGAGGAGGCA 12791 Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||||||||||||||||||||||||||| || || |||||| ||| || Sbjct 12790 GGCAAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCC 12731 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || || |||||||| ||||||||| Sbjct 12730 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAGAT 12671 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGT-GTC 126222 || || || || || || | |||||||| ||||||| | |||| | || || Sbjct 12670 ACCTTCGACGGCGGCAAAAGCGACGAGACGCTGGGCAAAGGTG---GACTCGTCGTCCTC 12614 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 | ||| || ||||| | ||||| |||| ||| ||||||| ||||| ||| || || Sbjct 12613 GATCCAGCGGATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTC 12554 Query 126283 AAAGAG-TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATG 126341 ||||| | | | | || || || ||||| || |||| || || || || | Sbjct 12553 GAAGAGATAGGTGCGCTGCT-TGGGCTCCTTGATATAGGTATCGATCAGGAGAGAGTAGG 12495 Query 126342 TTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 126400 |||| ||| | | | ||| || | |||| | ||||||| |||| |||||| Sbjct 12494 TTTCCGAGTGAATGTTCTCCATCAT-GATCTGAAAGCCGTAGAAGCAGCGGGCTTCGGGG 12436 Query 126401 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 126460 ||||| ||||||| | || | || ||||| || || || || || | Sbjct 12435 ATCTGCACCTCATTGCTGAAGCGCTGGACGAGGTTCTCGTTGACGATACCGTCAGAGGCG 12376 Query 126461 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTC 126517 || || || || |||| | || || | | || | |||||||| | | ||| Sbjct 12375 GCGAAGAAGGCAAGGACGTGAGAGATAAAGTAGCGCTCGTCGTCGTTCAGCCTGTTGTTC 12316 Query 126518 CAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||| | |||||||| |||||||| | || || || ||||| Sbjct 12315 CAGTCGCCGAGATCCTTGGAGAGATCGATTTCTTCGGCGGTCCA 12272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350523628960