Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq346 89.7 5e-13 >seq346 Length=29424 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || || |||||||| || | || |||||| | || Sbjct 4896 AGAACGAGATGCAGAGTAGATTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCATCC 4837 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||||||||| || ||| | ||||| |||||||| || || ||| | | || || || Sbjct 4836 TCAAGCTGCTTTCCCGCAAAGATGAGACGCTGCTGATCCGGGGGA--TACCTCCTTATCC 4779 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| || || | ||||| | || || || | || | |||| Sbjct 4778 TGGATCTTCGCCTTGACGTTGTCAATCGTATCGGACGACTCAACCTCAAGGGTGATGGTC 4719 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 ||||| || | || || ||||| ||||||||| Sbjct 4718 TTGCCCGTGAGGGTCTTGACGAAGATTTGCATT 4686 Score = 86.0 bits (94), Expect = 6e-12 Identities = 156/227 (69%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || |||| | ||| || || |||| || ||||| || ||||| |||||||| | | Sbjct 5364 CCACCACGCAGACGAAGGACAAGGTGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAG 5305 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | || | ||||||| |||||||| || || | || || ||||||||||| || || Sbjct 5304 AGAGTCCTTCCGTCTTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGG 5245 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| ||| || | || || | || || Sbjct 5244 ATACCCTCCTTATCCTGAATCTTGGCCTTCACATTGTCGATGGTGTCGGAAGACTCAACC 5185 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||| || || ||||| || || ||||| ||||| Sbjct 5184 TCCAGCGTGATGGTCTTTCCAGTTAAAGTCTTCAC-AAAATCTGCAT 5139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499642226829280