Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 428 4e-115 >seq2 Length=859439 Score = 428 bits (474), Expect = 4e-115 Identities = 1216/1837 (66%), Gaps = 52/1837 (3%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| || || ||| || ||||| ||| || | ||| Sbjct 393508 AACTACAACTACTTCGGCTTCAAGACCCTCGAGCGCTCCTACCTTCTCCGCATCAACGGC 393567 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 || ||||| | ||||| || || | |||||||||||| | || || |||||| | Sbjct 393568 GCCGTCGCCGAGAGGCCGCAGCACATGATCATGCGCGTCGCCGTAGGCATCCACGGCGAG 393627 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGA-CATGCGGGACAAGAGGTATACCATGGC 93893 ||||| ||| || | | | | | ||| |||| | |||| | ||| || Sbjct 393628 GACATCGAGAAGGTGATCGAGACGTAC-GAGCTCATGAGCAGCAAGTTCTTCACCCACGC 393686 Query 93894 CACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT 93953 | ||||| |||||||||||||| ||||| ||| ||| || ||||| ||||| | Sbjct 393687 TTCGCCGACGCTGTTCAACGCGGGTACCCCCCAGCCGCAGCTGAGCTCGTGCTTCCTCGT 393746 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 | | |||| ||| || || || | ||| | ||| ||| ||| || || Sbjct 393747 CGCCATGAAGGATGACAGTATTGAAGGTATCTACGATACCCTTAAGACCTGCGCATTGAT 393806 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 ||| || || || | | |||| | |||||| | | ||| | | ||| || || Sbjct 393807 CTCGAAGACTGCCGGTGTA-TCGGTCTTCACGTCCACAATATCCGTTCTACGGGCTCGTA 393865 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 |||| |||| |||||||| || ||||| || ||| |||| ||||| |||| |||||||| Sbjct 393866 CATC-GCGGGACCAATGGTACTTCCAATGGTCTCATCCCGATGCTGAGGGTGTTCAACAA 393924 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | |||| | ||||| |||||||| || | ||| ||| ||||||| |||| || Sbjct 393925 CACGGCCAGGTACGTCGACCAGGGCGGCAACAAAAGGCCCGGTGCTTTCGCAATCTACCT 393984 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 |||||| ||||||||||||||| | ||| ||||||| |||||||||||||| || || Sbjct 393985 CGAGCCGTGGCACGCGGACGTGTTCGAGTTCCTCGACCTCCGAAAGAACCACGGTAAGGA 394044 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || |||||||| ||||| |||||||| ||||||||||| ||||| || ||||| | Sbjct 394045 AGAGGTCAGGGCCAGGGACCTGTTCTACGCCCTCTGGGTGCCCGACCTGTTCATGAAGAG 394104 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 |||||| | ||| | |||||| || || || || || || | |||| || || || Sbjct 394105 GGTCGAGCAGAACGGTGACTGGAGCCTGTTCTGCCCTAACGAGGCTACCGGCCTTTCGGA 394164 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGA----ATCGCAGGGCAAG- 94428 |||| || | | || ||| | || | || ||||| | ||| || | | Sbjct 394165 TGTTTACGGCGAG-GAGTTCGAGAGCTCTACACCCGCTACGAGAAGACCGCCGGCCTCGC 394223 Query 94429 GC-CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 || ||||| || | | || ||||||| || || || |||| | ||| || Sbjct 394224 GCGCAGGACCGTCA---AGGCGCAGAAGCTG-GGTATGCCATTCTGGAGGCGCAGACCGA 394279 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 |||||| || || ||||| ||| ||||||| | |||| ||| ||||||| || | Sbjct 394280 GACGGGAACCCCGTACATGCTGTACAAGGACGCCTGCAACAAGAAGAGCAACCAGAAGAA 394339 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 ||| || |||||||||||| || |||||||| ||||| |||||||| | | || || Sbjct 394340 CCTGGGCACGATCAAGAGCTCTAACCTGTGCACGGAGATCGTCGAGTACTCCGC-CCCGA 394398 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTA 94667 ||| | || ||||| ||||| | || ||| |||| | || |||||| || || Sbjct 394399 TGAGGTAGCCGTGTGCAACCTCGCGTCGATCGCCCTGCCGACGTTCGTG-GACAT----- 394452 Query 94668 CACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG--ATGGTC 94725 || | | | || ||| | || |||| || | | ||||| | ||| Sbjct 394453 --CG-CGAAGTCCGAGTACGACTTCCAGAAGCTCCACGACGTGAC--GAAGGTCGTCGTC 394507 Query 94726 TTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCA 94785 || ||||||| | | ||||| |||| |||||||||| |||| | | |||||| Sbjct 394508 CGCAATCTGAACAAGATCATCGAGGTCAACTACTACCCCGTCGAGGAGCCAG-GAACTCC 394566 Query 94786 AACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATG 94845 ||| | || | || || | | ||||||| |||||| ||||||| || | || | Sbjct 394567 AACTTCCGCCACAGACCTAT-GCCGTCGGCGTTCAGGGTCTCGCGGATGCCTTTTTGGCG 394625 Query 94846 ATGCGTCTGCCCTACGACTCTGTCG-ACGCGGCGGGTTTGAATTTGAACATATTCGAAAG 94904 ||||| |||| | |||||| | || | || | |||| | | || ||||| | Sbjct 394626 CTGCGTATGCCGTTCGACTC-GCCGCAGGCTAAGCAGCTGAACCTCCAGATCTTCGAGAC 394684 Query 94905 CATTTATTACGGGGCCATGAAACAATCCGTC-CACTTGGCCAGATCGGACGGCGGGCCA- 94962 || || |||| ||| | || |||||| ||| | || ||| | ||| | Sbjct 394685 GATCTACCACGGCGCCGTCGAAGCCTCCGTCGAACTCGCGCA----GGA-GTTTGGCAAG 394739 Query 94963 CACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCTGGG 95020 |||| || ||| || || || | | || ||| || | ||||||||| | |||| Sbjct 394740 TACGACTCCTTCGAGGGTTCACCGGCCAGCAA-AGGCCA-GCTGCAGTTCGACATGTGGG 394797 Query 95021 GTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAACACG 95080 | || | || | | || | |||||||| | || | | || ||| |||| Sbjct 394798 GCGT-CACCCGACCGAGCTCTGGGACTGGGACTCCCTCAAGGAAAAAGTCTCCAAGCACG 394856 Query 95081 GTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTG 95140 | || ||| | || || || || |||||||| || || |||||| | |||||||| | Sbjct 394857 GCATGCGCAACTC-CTCCTCGTCGCGCCCATGCCTACCGCTTCCACGTCCCAGATCCTCG 394915 Query 95141 GCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCG 95200 | |||||||| |||||||||| ||| |||||| | ||| | | || || ||||||| Sbjct 394916 GTTTCAACGAGTGCTTCGAACCCTACACGTCCAACATCTACTCCCGCCGCGTCCTCGCCG 394975 Query 95201 GGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTGTGTG 95258 | ||||||| || | ||| | || ||| |||||| |||| |||||| | || Sbjct 394976 GCGAATTCCAGATCGTAAACCCGTGGCTGCTAAAGGACCT--CGTCGAACTGGGTCTCTG 395033 Query 95259 GGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCA 95318 | | || || | ||||||| | | || |||||| ||| |||||||||||||| | Sbjct 395034 GAGCGATAACATGAAGAACCGCATCATCGCCGACAACGGTTCCATCCAGAACATCCCGAA 395093 Query 95319 AATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGAT 95378 ||||| ||||||| || |||| ||||||||||| ||||||||| | || || || Sbjct 395094 CATACCCAAGGACATAAAATCGCTGTACAAGACCGTCTGGGAGATCTCACAAAAAGTAAT 395153 Query 95379 ACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNN 95438 ||||| ||||| | | | | |||||| |||||| Sbjct 395154 CATCGACATGGCGGCAGACAGGTCCGCGTTCATCGACCAGAGCCAGTCGCTGAACATCCA 395213 Query 95439 NATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGG 95498 || || |||| || ||| | ||||| ||| |||||||| |||| ||||| Sbjct 395214 CATTAAAGA-CCCAACATGGGTAAACTTACGTCTATGCACTTCTACGGCTGGAAGAAGGG 395272 Query 95499 TCTCAAGACCGGTATGTATTATTTGCGAACCA-GGCC 95534 ||||||||| || ||||| ||||| || |||| |||| Sbjct 395273 TCTCAAGACGGGAATGTACTATTTACGCACCATGGCC 395309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720652175520