Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2 141 9e-29 >seq2 Length=859439 Score = 141 bits (156), Expect = 9e-29 Identities = 1052/1661 (63%), Gaps = 55/1661 (3%) Strand=Plus/Minus Query 152822 CGATTGGCTCTGATCTATGAAAGCGTTACGGTCGGCCGCCATCTCAATCATGCGTTTTGC 152881 ||| |||||||| || ||||| ||| | ||| |||||||| || || || |||| Sbjct 395202 CGACTGGCTCTGGTCGATGAACGCGGACCTGTCTGCCGCCATGTCGATGATTACTTTTTG 395143 Query 152882 CTTCATCTCCCAGGCGGTTTTGTACAAATTTTTAACGCTATCCGGTATACCTTCA--ATG 152939 ||||||||| |||| ||||||| ||| | | | ||||| ||| ||| Sbjct 395142 TGAGATCTCCCAGACGGTCTTGTACAGCGATTTTATGTCCTTGGGTATG--TTCGGGATG 395085 Query 152940 TTCTGAATAGAGCCCTTGTGTGCAAAAATAGCGTTTCGT-AT-TTCGGGCGTGTACACGT 152997 ||||| || || || |||| || | || ||| ||| | || || || | | | Sbjct 395084 TTCTGGATGGAACCGTTGTCGGCGATGAT-GCGGTTCTTCATGTTATCGC-TCCAGAGAC 395027 Query 152998 TCAGTTTAATGAGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACA 153057 ||||| | |||||| | | || || |||| || | || || ||||| || | | Sbjct 395026 CCAGTTCGACGAGGTCCTTTAGCAGCCACGGGTTTACGATCTGGAATTCGCCGGCGAGGA 394967 Query 153058 CTCGTCTCAAATATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTT 153117 | || | | || | ||| ||| | ||||| ||| | ||||| || || || | Sbjct 394966 CGCGGCGGGAGTAGATGTTGGACGTGTAGGGTTCGAAGCACTCGTTGAAACCGAGGATCT 394907 Query 153118 GAGCCGTGGTTGCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTC 153177 | | ||||| ||||| |||||| ||| || | | || || |||| ||||||| | Sbjct 394906 GGGACGTGGAAGCGGTAGGCATGGGCGCGACGAGGAG-GAGTTGCGCATGCCGTGCT-TG 394849 Query 153178 GA-ATGTCGTCCTTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATG 153236 || | | ||||| | | | ||| ||||| ||| | | ||| || || ||||||| Sbjct 394848 GAGACTTTTTCCTTGAGGGAGTCCCAGTCCCAGAGCTCGGTCGG-GTGACGCCCCACATG 394790 Query 153237 TCGTACTGTAACACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCG 153296 ||| |||| | | ||| ||||| || || | || | ||| |||| Sbjct 394789 TCGAACTGCAGCTGGCCTTTGCTGGCCGGTGAACCCTCGAAGGAGTCGTACTTGCCAAAC 394730 Query 153297 CGTTGGGCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGT 153356 || || |||||| | || |||| ||||| | ||| || || ||| ||| || Sbjct 394729 TCCTGCGCGAGTTCGACGGAGGCTTCGACGGCGCCGTGGTAGATCGTCTCGAAGATCTGG 394670 Query 153357 TTATTGAGAACGGCCGCTT---CTTCGCTC--TCGTACGGCATGCGCAGCAGCACAAAGG 153411 || || | |||| || || ||| ||||||| |||||| || ||||| Sbjct 394669 AGGTTCAG-----CTGCTTAGCCTGCGGCGAGTCGAACGGCATACGCAGCGCCAAAAAGG 394615 Query 153412 CGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCG 153471 | || || |||||||| | |||||| | || |||| || |||| | ||| | Sbjct 394614 CATCCGCGAGACCCTGAACGCCGACGGC-ATAGGTCTGTGGCGGAAGTTGGAGTTCCTGG 394556 Query 153472 CGCTCGCTATGGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTT 153531 | | | | | ||| |||| ||| ||||| || ||||| || ||||| || || || | Sbjct 394555 CTC-CTCGACGGGGTAGTAGTTGACCTCGATGATCTTGTTCAGATTGCGGACGACGACCT 394497 Query 153532 TAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTC--ATTTCGTCGACGCGTACGCA--T 153587 | || | | | || |||| ||| || || || | |||| ||| | ||| | | Sbjct 394496 TCGTCACGTCGTGGAGCTTCTGGAAGTCGTAC-TCGGACTTCG-CGATGTCCACGAACGT 394439 Query 153588 CGATTCACGGCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGC 153647 || || ||| || ||||| || || || ||||| ||| |||| | || ||||| Sbjct 394438 CGG--CAGGGCGATCGACGCGAGGTTGCACACGGCTACCTCATCGGGG-CGGAGTACTCG 394382 Query 153648 ACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTG 153707 |||||||| | ||| ||||| || || || ||||| || | ||| ||||| || Sbjct 394381 ACGATCTCCGTGCACAGGTTAGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTC 394322 Query 153708 CGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACG 153767 ||||| ||||| ||| | ||||||||||| || |||||| |||| || | | Sbjct 394321 TTGTTGCAGGCGTCCTTGTACAGCATGTACGGGGTTCCCGTCTCGGTCTGCGCCTCCA-G 394263 Query 153768 ATAAACCTATGCAGGTCCTGCGC----TCGCACCCGCTGCCGATAGCGGCCCTCGCTCTC 153823 | | || ||| | |||||| || || || ||| |||| || |||| Sbjct 394262 AATGGCATACCCAGCTTCTGCGCCTTGACGGTCCTGCGCGCGAGGCCGGCGGTC-TTCTC 394204 Query 153824 GTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTG 153883 ||| || ||| || | ||| ||||| |||||||| || | ||||||| | || Sbjct 394203 GTAGCGGGTGTAGAG-CTCTCGAACTCCTCGCCGTAAACATCCGAAAGGCCGGTAGCCTC 394145 Query 153884 ATGCGGACACATCAGCGACCACATATCG-TCGGCGTTGACGCGTCGCATGAACAGATCCG 153942 | || || | ||| ||| | || || || | ||| | ||||||||| || | Sbjct 394144 GTTAGGGCAGAACAGGCTCCAGTCACCGTTCTGC-TCGACCCTCTTCATGAACAGGTCGG 394086 Query 153943 GCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTT 154002 |||||||||| ||||| | ||||| | ||| || || ||| || ||| || Sbjct 394085 GCACCCAGAGGGCGTAGAACAGGTCCCTGGCCCTGACCTCTTCCTTACCGTGGTT--CTT 394028 Query 154003 TC--AGATTGA-GCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGG 154059 || || | || | || | | | | ||| |||||||| || || | ||||| || | | Sbjct 394027 TCGGAGGTCGAGGAACTCGA-ACACGTCCGCGTGCCACGGCTCGAGGTAGATTGCGAAAG 393969 Query 154060 CAC----CTTTACGCTTTCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGC 154115 ||| | || | || |||||||| ||||||| | || | |||||||| || | | Sbjct 393968 CACCGGGCCTTTTG-TTGCCGCCCTGGTCGACGTACCTGGCCGTGTTGTTGAACACCCTC 393910 Query 154116 ACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCG 154175 | ||| || || || | | || || |||||| ||| | ||| | Sbjct 393909 AGCATCGGGATGAGACCATTGGAAGTACCATTGGTC-CCGCGATGTACGAGCCCGTAGAA 393851 Query 154176 CGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCG 154235 || | | || |||| || || || | | || || ||| || || |||||| Sbjct 393850 CGGATATTGTGGACGTGAAGACCGATACACCGGCAGT-CTTCGAGATCAATGCGCAGGTC 393792 Query 154236 CCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAA 154295 || || |||||| || || || || || || | | ||| | ||| ||||| Sbjct 393791 TTAAGGGTATCGTAGATACCTTCAATACTGTCATCCTTCATGGCGACGAGGAAGCACGAG 393732 Query 154296 CACATTTGCGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGT 154355 | || ||||| | | || ||||| || || || || ||||| || || | Sbjct 393731 CTCAGCTGCGGCTGGGGGGTACCCGCGTTGAACAGCGTCGGCGAAGCGTGGGTGAAGAAC 393672 Query 154356 TTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCG 154415 || |||||| | |||||| ||||| | | ||||| || |||||||| ||||| Sbjct 393671 TTGCTGCTCATGAGCTCGTACGTCTCGATCACCTTCTCGATGTCCTCGCCGTGGATGCCT 393612 Query 154416 AGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGAC 154456 | ||||||||||||| |||||||||||| | |||||||| Sbjct 393611 ACGGCGACGCGCATGATCATGTGCTGCGGCCTCTCGGCGAC 393571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259844248640