Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq2 104 2e-17 >seq2 Length=859439 Score = 104 bits (114), Expect = 2e-17 Identities = 261/386 (68%), Gaps = 28/386 (7%) Strand=Plus/Minus Query 145852 TTTAGAGATTGGCTCTGATCAATGAAAGGAGCCCGGTCGGCGGCCATGTCTATCATGCAC 145911 || || || |||||||| || ||||| | | || ||| || |||||||| || || || Sbjct 395207 TTCAGCGACTGGCTCTGGTCGATGAACGCGGACCTGTCTGCCGCCATGTCGATGATT-AC 395149 Query 145912 TTTGATTTA-ATTTCCCATGCGGTTTT--AAAGAGATCCTTGACGTGCTGGGGTAT-TTC 145967 ||| | | || ||||| |||| || | || ||| || | || || |||||| ||| Sbjct 395148 TTTTTGTGAGATCTCCCAGACGGTCTTGTACAGCGAT--TTTATGTCCTTGGGTATGTTC 395091 Query 145968 GTCAATGTTCTGCACAGACCCATTTTCGGCCAATATTTTGTTGCGCAATTCTGGAGTGTA 146027 | | ||||||| | || || || ||||| | || |||| |||| | ||| Sbjct 395090 GGGA-TGTTCTGGATGGAACCGTTGTCGGCGA------TGATGCGG--TTCTTCA-TGTT 395041 Query 146028 AATGTTCAAG---------TCTACGAGGGCCTTGATGAGATACTGGTTGACCACCTGAAA 146078 | | || || || |||||| |||| | || || |||| || | ||| || Sbjct 395040 ATCGCTCCAGAGACCCAGTTCGACGAGGTCCTTTAGCAGCCACGGGTTTACGATCTGGAA 394981 Query 146079 CTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACGGCTCGAACGACTCGTT 146138 ||||||||||| ||||| | || | |||| ||| | || ||||| ||||||| Sbjct 394980 TTCGCCGGCGAGGACGCGGCGGGAGTAGATGTTGGACGTGTAGGGTTCGAAGCACTCGTT 394921 Query 146139 GTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCT 146198 | |||||| ||||| | ||| | ||||||||||||| ||| || || | ||||| | Sbjct 394920 GAAACCGAGGATCTGGGACGTGGAAGCGGTAGGCATGGGCGCGACGAG-GAGGAGTTGCG 394862 Query 146199 CACGCCGTGTCTTTGAATCTTTTCCC 146224 || |||||| ||| || ||||| || Sbjct 394861 CATGCCGTG-CTTGGAGACTTTTTCC 394837 Score = 86.0 bits (94), Expect = 6e-12 Identities = 106/144 (74%), Gaps = 1/144 (1%) Strand=Plus/Minus Query 146634 GGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTC 146693 |||||| || || | ||| || ||||| ||| || | || | |||| || ||||| Sbjct 394432 GGCGATCGACGCGAGGTTGCACACGGCTACCTCATCGGGG-CGGAGTACTCGACGATCTC 394374 Query 146694 GGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCA 146753 | ||| ||||| || |||||| |||||| || || ||||| || ||||||||| Sbjct 394373 CGTGCACAGGTTAGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCA 394314 Query 146754 GGGGTCCTTGTAGAGCATGTACGG 146777 || ||||||||| ||||||||||| Sbjct 394313 GGCGTCCTTGTACAGCATGTACGG 394290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498351170880