Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2 217 2e-51 seq162 158 1e-33 >seq2 Length=859439 Score = 217 bits (240), Expect = 2e-51 Identities = 847/1302 (65%), Gaps = 41/1302 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 |||||||||| |||||| || || |||||||| ||| ||| | ||| |||| ||||| Sbjct 394955 TAGATGTTGGACGTGTAGGGTTCGAAGCACTCGTTGAAACCGAGGATCTGGGACGTGGAA 394896 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || || |||||||| || | ||| ||| |||||| | || | | |||| Sbjct 394895 GCGGTAGGCATGGGCGCGACGAGGAGGA-GTTGCGCATGCCGTGCTTGGAGACTTTTTCC 394837 Query 116023 TTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTC---TCCCCCTCCCACATATCAAACTGG 116079 ||||||| ||||||||| || |||| ||| | | | ||||||| || ||||| Sbjct 394836 TTGAGGGAGTCCCAGTCCCAG---AGCTCGGTCGGGTGACGC-CCCACATGTCGAACTGC 394781 Query 116080 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 116139 || |||| | || || || ||||| || | || || ||| ||| ||| Sbjct 394780 AGCTGGCCTTTGCTGGCCGGTGAACCCTCGAAGGAGTCGTACTTGCCAAACTCCTGCGCG 394721 Query 116140 AATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 116199 | |||| | || |||| ||| |||| || || ||||| || || | |||| Sbjct 394720 AGTTCGACGGAGGCTTCGACGGCGCCGTGGTAGATCGTCTCGAAGATCTGGAGGTTCAGC 394661 Query 116200 GCCTTGGCCT-CGTCGGAATCAAACGCGAGACG--GCACAAAATAAATACATCCGCGAGA 116256 ||| |||| || || | || |||| | ||| || | ||| || ||||||||||| Sbjct 394660 TGCTTAGCCTGCGGCG-AGTCGAACGGCATACGCAGCGCCAAA--AAGGCATCCGCGAGA 394604 Query 116257 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG 116316 || || || |||| | || | || | || | | || || || | || ||| ||| Sbjct 394603 CCCTGAACGCCGACGGCA-TAGGTCTGTGGCGGAAGTTGGAGTTCCTGGCTC-CTCGACG 394546 Query 116317 GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCA 116376 || || | || ||||| | | | || ||||| | ||| ||||| || | || Sbjct 394545 GGGTAGTAGTTGACCTCGATGATCTTGTTCAGATTGCGGACGACGACCTTCGTCACGTCG 394486 Query 116377 TGAAGCTTTTCGTAATCAAAACTGCGAGT-CTCTTCATTGACATACTTAGGAAGGGCGAT 116435 || ||||| | | | || | || || | | | | || || | || |||||||| Sbjct 394485 TGGAGCTTCTGGAAGTCGTA-CTCGGACTTCGCGATGTCCACGAACGTCGGCAGGGCGAT 394427 Query 116436 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 116495 ||||| || || ||||| | |||||| | | |||||| | || ||||| || Sbjct 394426 CGACGCGAGGTTGCACACGGCTACCTCATCGGGG-CGGAGTACTCGACGATCTCCGTGCA 394368 Query 116496 CAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555 || || || ||||| || ||||||| |||||| || || ||| |||| || || || Sbjct 394367 CAGGTTAGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCGTC 394308 Query 116556 CTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATAC 116615 |||||| ||||| || || || |||||||| || || | || ||||| || | || | Sbjct 394307 CTTGTACAGCATGTACGGGGTTCCCGTCTCGGTCTGCGCCTCCAGAATGGCATACCCAGC 394248 Query 116616 ATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTC---CTCCTCGTACTTTGTGTAGAG 116672 || ||| || | || || | || | || | || |||||| |||||||| Sbjct 394247 TTCTGCGCCTTG-ACGGTCCTGCGCGCGAGGCCGGCGGTCTTCTCGTAGCGGGTGTAGAG 394189 Query 116673 GGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAG 116732 | || ||||| || || | | || || || || | |||| | || ||||| || Sbjct 394188 CTC-TCGAACTCCTCGCCGTAAACATCCGAAAGGCCGGTAGCCTCGTTAGGGCAGAACAG 394130 Query 116733 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGA 116792 ||| | ||| || ||| |||| ||||||||| ||||| || | |||||| || | Sbjct 394129 GCTCCAGTCACCGTTCTGCTCGACCCTCTTCATGAACAGGTCGGGCACCCAGAGGGCGTA 394070 Query 116793 GAAGAGATCCC-GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGT 116851 ||| || |||| | | || || |||| | || || || || | || | || | Sbjct 394069 GAACAGGTCCCTGGCCCTGACCT-CTTCCTTACCGTGGTTCTTTCGGAGGTCGAGGAACT 394011 Query 116852 CCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGACGA 116907 | | | |||||||||||||| || ||||| | |||| | ||| |||| | | Sbjct 394010 CGAACACGTCCGCGTGCCACGGCTCGAGGTAGATTGCGAAAGCACCGGGCCTTTTGTTG- 393952 Query 116908 CCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCA 116967 || |||||| || ||||| ||||| ||| || || | ||||| || |||| |||| Sbjct 393951 CCGCCCTGGTCGACGTACCTGGCCGTGTTGTTGAACACCCTCAGCATCGGGATGAGACCA 393892 Query 116968 TCAGATTGGCCATTTGTCCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTG 117026 | || ||||| ||||| ||| |||||| | | | | || || ||||| ||| Sbjct 393891 TTGGAAGTACCATTGGTCCCGCGATGTACGAGCC--CGTAGAACGGATATTGTGGACGTG 393834 Query 117027 CATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGAT 117086 | ||| ||| | || || ||| ||||| |||||| | | || | ||||||| Sbjct 393833 AAGACCGATA-CACCGGCAGTCTTCGAGATCAATGCGCAGGTCTTAAGGGTATCGTAGAT 393775 Query 117087 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC---AGCTCGACATTTGTGGCCT 117143 || || || |||| |||| | |||| |||||||| |||| || || ||| Sbjct 393774 ACCTTCAATACTGTCATCCTTCATGGCGACGAGGAAGCACGAGCT---CAGCTGCGGCTG 393718 Query 117144 TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 || ||||| |||||||| || || || | |||||| |||| Sbjct 393717 GGGGGTACCCGCGTTGAACAGCGTCGGCGAAGCGTGGGTGAA 393676 >seq162 Length=94999 Score = 158 bits (174), Expect = 1e-33 Identities = 354/523 (68%), Gaps = 13/523 (2%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||||||||||||||||||||||||||| || || |||||| ||| || Sbjct 12789 GCAAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCG 12730 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||||||||| |||||||| | |||||| || || ||||| ||| ||||||||| Sbjct 12729 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAGATA 12670 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGT-ATCA 127696 || || || || || || | ||||||| |||||||| ||||| | || || Sbjct 12669 CCTTCGACGGCGGCAAAAGCGACGAGACGCTGGGCAAAGG---TGGACTCGTCGTCCTCG 12613 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | ||| || ||||| | ||||| |||| ||| || |||| ||||| ||| || || Sbjct 12612 ATCCAGCGGATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTCG 12553 Query 127757 AAGAG-TTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGT 127815 ||||| | | | | || || || ||||| || |||| || || || || || Sbjct 12552 AAGAGATAGGTGCGCTGCT-TGGGCTCCTTGATATAGGTATCGATCAGGAGAGAGTAGGT 12494 Query 127816 TTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTA 127874 ||| ||| | | | ||| || | |||| | ||||||| |||| |||||| | Sbjct 12493 TTCCGAGTGAATGTTCTCCATCAT-GATCTGAAAGCCGTAGAAGCAGCGGGCTTCGGGGA 12435 Query 127875 TCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 127934 |||| ||||||| | || | || ||||| || || || || || | | Sbjct 12434 TCTGCACCTCATTGCTGAAGCGCTGGACGAGGTTCTCGTTGACGATACCGTCAGAGGCGG 12375 Query 127935 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCAG---GGTCTTCC 127991 | || || || |||| | || || | | || | |||||||| | | |||| Sbjct 12374 CGAAGAAGGCAAGGACGTGAGAGATAAAGTAGCGCTCGTCGTCGTTCAGCCTGTTGTTCC 12315 Query 127992 AGTCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||||| |||||||||| |||||||| | || || || ||||| Sbjct 12314 AGTCGCCGAGATCCTTGGAGAGATCGATTTCTTCGGCGGTCCA 12272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613504040437920