Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq162 237 2e-57 seq2 172 9e-38 >seq162 Length=94999 Score = 237 bits (262), Expect = 2e-57 Identities = 528/785 (67%), Gaps = 22/785 (3%) Strand=Plus/Minus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | ||| ||| |||||||||||||||||||||||| ||| | || || Sbjct 13083 CTTCTGGTAGTCCGAGACACGCTTCTCGAAAAAGTTGGTCTTGCCAGCCAAGCTGATCGA 13024 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 |||||||| |||| |||||| || ||| |||| ||||| ||| | || Sbjct 13023 CTCCATGAAGTCGAAGGGGTTCGCAGAGTTGTAGACCTTCCTGTTGCCGAGGGCCACAAG 12964 Query 159748 CAACCTGTCTGCCACAAATTCGATGTA--GCTACACATCTGCTCACAGTTGATCCCCAGC 159805 || | ||| || || || |||||||| ||| || || ||| |||||| |||| Sbjct 12963 CAGGCGGTCGGCGACGAACTCGATGTATTGCTTCA--TCAGCTTGGCGTTGATGCCCAAG 12906 Query 159806 AGC-CTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCAC 159864 || | ||||| || || |||| || ||||||| ||||||| || || || || Sbjct 12905 AGAGCGCACGGG-AGAGCCTCCGTAAGGAACTCCTGCTCAATCGTAACGGCCTCA---AC 12850 Query 159865 AATCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAA-----TGTGGTCCTTAAACAGG 159919 || |||| |||| || ||||| | || | | | || ||| Sbjct 12849 GAT------GACAGCTTCGACGGCCTCCTTGCTCGGCTGTTGTTGAGATGGCTGAAGAGG 12796 Query 159920 AGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATG 159979 ||||| ||||||||| ||| || |||||||| || ||||||| ||||||||| | | | Sbjct 12795 AGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTC 12736 Query 159980 AGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAA 160039 ||||| ||||||| |||||| |||||||| || ||||| || || | ||| || || Sbjct 12735 AGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAG 12676 Query 160040 AAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCA 160099 ||||| || || ||||| ||||| || ||||| | || |||| | || | | ||| Sbjct 12675 AAGATACCTTCGACGGCGGCAAAAGCGACGAGACGCTGGGCAAAGGTGGACTCGTCGTCC 12616 Query 160100 TGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCG 160159 | | |||| | ||||||| || |||||||| ||||||||| ||| ||||| ||| Sbjct 12615 TCGATCCAGCGGATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCG 12556 Query 160160 TTAAACA-ATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTA 160218 | || | || || | ||| ||| |||||||| ||| | ||||| ||||| Sbjct 12555 TCGAAGAGATAGGTGC-GCTGCTTGGGCTCCTTGATATAGGTATCGATCAGGAGAGAGTA 12497 Query 160219 CATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAG 160278 |||| | ||| | || || || ||||||||| |||||| | || || | Sbjct 12496 GGTTTCCGAGTGAATGTTCTCCATCATGATCTGAAAGCCGTAGAAGCAGCGGGCTTCGGG 12437 Query 160279 ATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGC 160338 ||||||||| | |||| | || | || || | || || | ||||| | ||| Sbjct 12436 GATCTGCACCTCATTGCTGAAGCGCTGGACGAGGTTCTCGTTGACGATACCGTCAGAGGC 12377 Query 160339 CGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTC 160398 || ||||| || | ||||||||||| || | | |||||| | ||| || || || | Sbjct 12376 GGCGAAGAAGGCAAGGACGTGAGAGATAAAGTAGCGCTCGTCGTCGTTCAGCCTGTTGTT 12317 Query 160399 CCAGT 160403 ||||| Sbjct 12316 CCAGT 12312 >seq2 Length=859439 Score = 172 bits (190), Expect = 9e-38 Identities = 385/569 (68%), Gaps = 13/569 (2%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898 || ||| || ||||| ||||||||| ||| | | || | | | ||||||||| || Sbjct 395342 CTGGTCGACAGTGAATTGAATGGCGGCAGAGGCGGCCATGGTGCGTAAATAGTACATTCC 395283 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958 ||||| || ||||||| ||| ||||| | |||||| || | ||||| | || |||||| Sbjct 395282 CGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATAGACGTAAGTTTACCCATGTTGGG 395223 Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGC 204018 || ||||| |||||||| |||||||| ||||||||||| | | || ||||| || Sbjct 395222 -TCTTTAATGTGGATGTTCAGCGACTGGCTCTGGTCGATGAACGCGGACCTGTCTGCCGC 395164 Query 204019 CATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTG 204078 ||| | ||| || || || || |||||||| || |||||| ||| | | ||| Sbjct 395163 CATGTCGATGATTACTTTTTGTGAGATCTCCCAGACGGTCTTGTACAGCGATTTTATGTC 395104 Query 204079 TTGAGGCACATCTTC-CCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTC 204136 | || || ||| | || || ||| || ||||||||||| || | | || || Sbjct 395103 CTTGGG--TATGTTCGGGATGTTCTGGATGGAACCGTTGTCGGCGATGATGCGGTTCTTC 395046 Query 204137 GTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATC 204196 | | || | ||| | |||| || || ||| | ||| ||||| | |||| Sbjct 395045 ATGTTATCGCTCCAGAGACCCAGTTCGACGAGGTCCTTTAGCAGCCACGGGTTTACGATC 394986 Query 204197 TGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCC 204256 || || || |||| || || | |||| | | | |||| ||| | |||||||| | Sbjct 394985 TGGAATTCGCCGGCGAGGACGCGGCGGGAGTAGATGTTGGACGTGTAGGGTTCGAAGCAC 394926 Query 204257 TCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAG 204316 |||||| |||| ||||| | ||| || || |||||||| || | ||| | |||| Sbjct 394925 TCGTTGAAACCGAGGATCTGGGACGTGGAAGCGGTAGGCATGGGCGCGACGAGGA-GGAG 394867 Query 204317 TTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTC---GTGCATCGCA 204373 ||||||| |||| || ||| | ||| || ||| |||||| | || ||| Sbjct 394866 TTGCGCATGCCGTGCTTGGAGACTTTTTCCTTGAGGGAGTCCCAGTCCCAGAGC-TCGGT 394808 Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTG 204402 | || | |||||||||||||||||||| Sbjct 394807 CGGG---TGACGCCCCACATGTCGAACTG 394782 Score = 89.7 bits (98), Expect = 8e-13 Identities = 394/615 (64%), Gaps = 14/615 (2%) Strand=Plus/Minus Query 205160 ACCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATT 205219 ||||||| ||| ||||||||| | ||| ||| |||| ||||| || | |||||| | Sbjct 394107 ACCCTCTTCATGAACAGGTCGGGCACCCAGAGGGCGTAGAACAGGTCCCTGGCCCTGACC 394048 Query 205220 CCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGG 205278 | || | || |||||||| | ||| || || || | | ||| ||||||||||| Sbjct 394047 TCTTCCTTACCGTGGTTCTTTCGGAGGTCGAGG-AACTCGAACACGTCCGCGTGCCACGG 393989 Query 205279 CTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGT 205338 ||| | | | || | || || ||||| ||||| || |||||||| || | | Sbjct 393988 CTCGAGGTAGATTGCGAAAGCACCGGGCCTTTTGTTGCCGCCCTGGTCGACGTACCTGGC 393929 Query 205339 CATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTT 205398 | | |||||| || | ||||||||| | ||||| |||| || || || || | | Sbjct 393928 CGTGTTGTTGAACACCCTCAGCATCGGGATGAGACCATTGGAAGTACCATTGGTCCCG-C 393870 Query 205399 GATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCG----CCAATCCCGCCAGAAC 205454 |||| |||||| || | | ||| ||| || | || || | || | | Sbjct 393869 GATGTACGAGCCCGTAGAACGGATATTG----TGGACGTGAAGACCGAT-ACACCGGCAG 393815 Query 205455 ACTTGGCGATCTGGGCGCA-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCC 205513 ||| | |||| ||||| |||| || || |||||| ||| | || || ||| Sbjct 393814 TCTTCGAGATCAATGCGCAGGTCTT-AAGGGTATCGTAGATACCTTCAATACTGTCATCC 393756 Query 205514 GCCAGTGTCACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGC 205573 || | || || ||||||| ||||| | | ||| ||||||| ||| ||| Sbjct 393755 TTCATGGCGACGAGGAAGCACGAGCTCAGCTGCGGCTGGGGGGTACCCGCGTTGAACAGC 393696 Query 205574 GTGGGGCTGGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTC 205633 || || |||||| ||||| ||| ||||| | ||| ||||| | ||| || Sbjct 393695 GTCGGCGAAGCGTGGGTGAAGAACTTGCTGCTCATGAGCTCGTACGTCTCGATCACCTTC 393636 Query 205634 TCCAGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCC 205693 || | || |||||| || |||| ||||| | ||||| | ||| || || ||||| Sbjct 393635 TCGATGTCCTCGCCGTGGATGCCTACGGCGACGCGCATGATCATGTGCTGCGGCCTCTCG 393576 Query 205694 ATCACCCTCTCGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAAG 205753 || |||| | ||| || |||| | ||| ||||| || | | || || Sbjct 393575 GCGACGGCGCCGTTGATGCGGAGAAGGTAGGAGCGCTCGAGGGTCTTGAAGCCGAAGTAG 393516 Query 205754 TTGAAGGTGTAGTCC 205768 ||| || |||||||| Sbjct 393515 TTGTAGTTGTAGTCC 393501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795151104950720