Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq162 342 5e-89 seq346 125 7e-24 seq249 96.9 3e-15 >seq162 Length=94999 Score = 342 bits (378), Expect = 5e-89 Identities = 582/829 (70%), Gaps = 26/829 (3%) Strand=Plus/Minus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| ||||| || || || || ||||| || | ||| || || |||||||| Sbjct 13061 TTCTCGAAAAAGTTGGTCTTGCCAGCCAAGCTGATCGACTCCATGAAGTCGAAGGGGTTC 13002 Query 132685 GCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 || | ||||||| ||| | |||||| || | || ||||| | |||||| |||||| Sbjct 13001 GCAGAGTTGTAGACCTTCCTGTTGCCGA---GGGCCACAAGCAGGCGGTCGGCGACGAAC 12945 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGA-CGCACCGGCAGCGCTT 132799 |||||||||||| ||| | || || | | | || || ||| ||||| || || || | Sbjct 12944 TCGATGTATTGCTTCATCAGCTTGGCGTTGATGCCCAAG-AGAGCGCACGGG-AGAGCCT 12887 Query 132800 CGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTC---GGTGACGATTTCCCTAACGCGCG 132856 | || || || ||||| || | || || || | |||| ||| ||| | Sbjct 12886 CCGTAAGGAACTCCTGCTCAATCGTAACGGCCTCAACGATGACAGCTTCG---ACGGCCT 12830 Query 132857 CCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGC 132916 || ||||||| |||| | ||| |||| | | ||| ||||||||| || | | Sbjct 12829 CCTTGCTCGGCTGTTGTTG-AGATGGCTGAAGAGGAGGCAGGCAAAGTCGGTGTGGAGAC 12771 Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 ||||||| | ||| ||||| |||||| ||| |||| |||||||||||| || || || | Sbjct 12770 CCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGACCACGCTTCT 12711 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 ||||||| || ||||||||||| || ||||||| || |||||||| || |||| Sbjct 12710 TGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAGATACCTTCGACGGCGGCAAAAG 12651 Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGG 133096 | || || |||| | | || |||| || | | |||||||||| | ||||| |||| Sbjct 12650 CGACGAGACGCTGGGCAAAGGTGGACTCGTCGTCCTCGATCCAGCGGATGGCCCAGTCGG 12591 Query 133097 CCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCG 133156 |||| | |||| |||||| || || ||||| |||| || | | || | | || | Sbjct 12590 CCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTCGAAGAGA--TAGGTGCGCTGCTT 12533 Query 133157 AGGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCAT 133214 || | | ||||| ||||| ||| || || |||||||||| | ||||||||| Sbjct 12532 GGGCTCCTTGATATAGGTATCGATCAGGAGAGAGTAGGTTTCCGAGTGAATGTTCTCCAT 12473 Query 133215 GGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACG 133274 ||| ||||||||||| ||||| || || ||| | |||||| || | ||| || Sbjct 12472 CATGATCTGAAAGCCGTAGAAGCAGCGGGCTTCGGGGATCTGCACCTCATTGCTGAAGCG 12413 Query 133275 CTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTT 133334 || ||| || || ||||||||||| ||||| ||||||||| ||||| || ||||| Sbjct 12412 CTGGACGAGGTTCTCGTTGACGATACCGTCAGAGGCGGCGAAGAAGGCAAGGACGTGAGA 12353 Query 133335 GATGAAATGGCGCTCGTTGTCGTTCA---AGCGCTCCCAGTCGCGCGTG-TCCTTGGACA 133390 ||| || | |||||||| |||||||| | | |||||||| || | |||||||| | Sbjct 12352 GATAAAGTAGCGCTCGTCGTCGTTCAGCCTGTTGTTCCAGTCGC-CGAGATCCTTGGAGA 12294 Query 133391 GGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | || | || ||| ||||||| ||||| |||||||| || |||||||| Sbjct 12293 GATCGATTTCTTCGGCGGTCCAGAACGATGCCTCGGCCTTCTTGTACAT 12245 >seq346 Length=29424 Score = 125 bits (138), Expect = 7e-24 Identities = 160/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 ||||||||| ||||| || || ||||||||||| ||||||||| | || || ||| | | Sbjct 4686 AATGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTTGAGTCGTC 4745 Query 38303 CGACA-GCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 ||| | | || |||| | || | || |||| || || |||| | |||| | || | Sbjct 4746 CGATACGATTGACAACG-TCAAGGCGAAGATCCAGGATAAGGAGGTA--TCCCCCGGATC 4802 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||||| || ||||| || || | ||||||||| ||||||| Sbjct 4803 AGCAGCGTCTCATCTTTGCGGGAAAGCAGCTTGAGGATGGCCGCACCCTCTCGGACTACA 4862 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||||| |||||| | || |||||| | || || || Sbjct 4863 ACATCCAGAAGGAATCTACTCTGCATCTCGTTCTCCG 4899 >seq249 Length=58106 Score = 96.9 bits (106), Expect = 3e-15 Identities = 141/196 (72%), Gaps = 9/196 (5%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| || || ||||||||||| || |||||| |||| || ||| || Sbjct 56307 AAAATGCAGATCTTCGTCAAGACCCTCACGGGCAAGAC-ATCACCCTCGAGGTTGAGTCC 56365 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAAT---TCCCGC- 38356 | |||| | | | | | || | || |||| ||||| ||||| |||||| Sbjct 56366 TCTGACACCATCAACAATATCAAGGCCAAGATCCAAGACAA----GGAATACATCCCGCT 56421 Query 38357 CGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGA 38416 |||||| ||||| || || | ||| || || ||||| || | | ||||| || ||| Sbjct 56422 CGACCAGCAGCGTCTGATCTTCGCCGGAAAGCAGCTCGAAAATGGCCGCACGCTGTCCGA 56481 Query 38417 CTACAACATCCAAAAG 38432 ||| |||||||||||| Sbjct 56482 CTATAACATCCAAAAG 56497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500170224110080