Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 187 3e-42 seq162 140 4e-28 >seq2 Length=859439 Score = 187 bits (206), Expect = 3e-42 Identities = 1107/1743 (64%), Gaps = 60/1743 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||||| ||||| | || ||||| || || || || || || Sbjct 393583 CCGCAGCACATGATCATGCGCGTCGCCGTAGGCATCCACGGCGAGGACATCGAGAAGGTG 393642 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||| ||||| ||| | | | |||| |||||| | || || || ||| Sbjct 393643 ATCGAGACGTACGAGCTCATGAGCAGCAAGTTCTTCACCCACGCTTCGCCGACGCTGTTC 393702 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| ||||| || || || || | || ||||| | || | ||||| || Sbjct 393703 AACGCGGGTACCCCCCAGCCGCAGCTGAGCTCGTGCTTCCTCGTCGCCATGAAGGATGAC 393762 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | || || |||| || || | || || ||||| ||| || ||| Sbjct 393763 AGTATTGAAGGTATCTACGATACCCTTAAGACCTGCGCATTGATCTCGAAGACTGCCGGT 393822 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGAGGTACAAA 111910 | |||||| | ||| |||| || || | | | | |||||| | | || || || Sbjct 393823 G-TATCGGTCTTCACGTCCACAATATCCGTTCTACG--GGCTCGTACATCGCGGGACCAA 393879 Query 111911 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 111970 |||| || ||||| | || || ||||| | || || ||| ||| || | || || Sbjct 393880 TGGTACTTCCAATGGTCTCATCCCGATGCTGAGGGTGTTCAACAACACGGCCAGGTACGT 393939 Query 111971 AAACCAAGCTGGGCGTCGCAAGG----GATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026 |||| | || | | |||| | || ||||| |||| || ||||| ||||||| Sbjct 393940 CGACCAGGGCGG-CAACAAAAGGCCCGGTGCTTTCGCAATCTACCTCGAGCCGTGGCACG 393998 Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC 112086 |||| | | |||||||| || | || ||||| ||| | || |||| || | Sbjct 393999 CGGACGTGTTCGAGTTCCTCGACCTCCGAAAGAACCACGGTAAGGAAGAGGTCAGGGCCA 394058 Query 112087 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 112146 | || || |||| ||| |||||| | || || || ||||||||||| || ||| ||| | Sbjct 394059 GGGACCTGTTCTACGCCCTCTGGGTGCCCGACCTGTTCATGAAGAGGGTCGAGCAGAACG 394118 Query 112147 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206 | | ||| || || || || || |||| |||| || || |||| || |||| Sbjct 394119 GTGACTGGAGCCTGTTCTGCCCTAACGAGGCTACCGGCCTTTCGGATGTTTACGGCGAGG 394178 Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGG----GCGACTGCGACGGTG 112262 |||| | || |||||||| ||||| ||||| | ||| ||| ||| || Sbjct 394179 AGTTCG-AGAGCTCTACACCCGCTACGA-GAAGACCGCCGGCCTCGCGCGCAGGACCGT- 394235 Query 112263 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 | || || || | || | || ||||| || | || |||||||| || || || || Sbjct 394236 CAAGGCGCAGAAGCTGGGTATGCCATTCTGGAGGCGCAGACCGAGACGGGAACCCCGTAC 394295 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||||| ||||| |||||||| ||| | ||||| || || ||||| |||| ||||||| Sbjct 394296 ATGCTGTACAAGGACGCCTGCAACAAGAAGAGCAACCAGAAGAACCTGGGCACGATCAAG 394355 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 || || ||||| || || || ||| | || | | | | |||||| || ||||| Sbjct 394356 AGCTCTAACCTGTGCACGGAGATCGTCGAGTACTCCG-CCCCGATGAGGTAGCCGTGTGC 394414 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC---ATTTGAT 112499 |||||||| || ||||| || || | || ||||| || | | ||| | | || Sbjct 394415 AACCTCGCGTCGATCGCCCTGCCGACGTTCGTGGA--CATCG-CGAAGTCCGAGTACGAC 394471 Query 112500 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559 | | || |||||||| || ||||| ||| || || |||| | || || Sbjct 394472 TTCCAGAAGCTCCACGACGTGACGAAGGTCGTCGTCCGCAATCTGAACAAGATCATCGAG 394531 Query 112560 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619 || | |||||||| ||| || | || || || | | ||| | || | || Sbjct 394532 GTCAACTACTACCCCGTCGAG-GAGCCAGGAACTCCAACTTCCGCCACAGACCTA-TGCC 394589 Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTC---- 112675 |||| || || ||||||||||||| || |||| ||| || || ||| Sbjct 394590 GTCGGCGTTCAGGGTCTCGCGGATGCCTT-----TTTGGCGCTGCGTATGCCGTTCGACT 394644 Query 112676 CGACG-AAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734 || || | || ||| | | || | || || ||||| || || |||| ||| | | Sbjct 394645 CGCCGCAGGCTAAGCAGCTGAACCTCCAGATCTTCGAGACGATCTACCACGGCGCCGTCG 394704 Query 112735 -AGGCGAGTTCGGAGTTG-GCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792 || | ||| | | | |||| ||| ||| || || |||| |||||||| || Sbjct 394705 AAGCCTCCGTCGAACTCGCGCAGGAGTT--TGGCAAGTACGACTCCTTCGAGGGTTCACC 394762 Query 112793 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA---GACCAAGCTTCACTA 112849 || |||| ||| || || || ||||||| || | |||| |||| || Sbjct 394763 GGCCAGCAAAGGCCAGCTGCAGTTCGACATGTGGG-GCGTCACCCGACCGAGCT---CTG 394818 Query 112850 CGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 112909 ||||||||| | ||||||||| || || | || | || ||| || | | Sbjct 394819 GGACTGGGACTCCCTCAAGGAAAAAGTCTCCAAGCACGGCATGCGCAAC-TCCTCCTCGT 394877 Query 112910 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 112969 || || ||||| || || ||||| | || ||| | ||| || || ||||| ||||| Sbjct 394878 CGCGCCCATGCCTACCGCTTCCACGTCCCAGATCCTCGGTTTCAACGAGTGCTTCGAACC 394937 Query 112970 CTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAA 113029 ||||||| | |||||||| | | |||||| || || || ||| || ||| Sbjct 394938 CTACACGTCCAACATCTACTCCCGCCGCGTCCTCGCCGGCGAATTCCAGATCGTAAACCC 394997 Query 113030 GCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCAT 113089 | || | | |||||| || | ||||||||| | | | |||||| | | ||| Sbjct 394998 GTGGCTGCTAAAGGACCTCGTCGAACTGGGTCTCTGGAGCGATAACATGAAGAACCGCAT 395057 Query 113090 ----GGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGA 113145 | || | | |||||||| || || || | | || || | || || || Sbjct 395058 CATCGCCGACAAC----GGTTCCATCCAGAACATCCCGAACATACCCAAGGACATAAAAT 395113 Query 113146 AGTTGTACCGCACAGTTTGGGAAATC-AAGATGAAGGATGTCATTGACATGGCCGCAGAT 113204 | ||||| || || ||||| ||| | | ||| | |||| |||||||| ||||| Sbjct 395114 CGCTGTACAAGACCGTCTGGGAGATCTCACAAAAAGTA-ATCATCGACATGGCGGCAGA- 395171 Query 113205 CGTGGTCGC-TTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCCAACGAT 113263 | | ||| ||||| || || || || |||| | ||| |||| || | || Sbjct 395172 CAGGTCCGCGTTCATCGACCAGAGCCAGTCGCTGAACATCCACAT-TAAAGACCCAACAT 395230 Query 113264 GTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTA 113323 | || || | ||||||||| | ||| | ||||||||||||||||| ||||| ||||| Sbjct 395231 GGGTAAACTTACGTCTATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACGGGAATGTA 395290 Query 113324 TTA 113326 || Sbjct 395291 CTA 395293 >seq162 Length=94999 Score = 140 bits (154), Expect = 4e-28 Identities = 127/160 (79%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||| |||| ||| |||| ||||| || || |||||||||||| |||||| | Sbjct 12630 CCTTTGCCCAGCGTCTCGTCGCTTTTGCCGCCGTCGAAGGTATCTTCTTCAGTGGTTCAT 12689 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || ||| || | |||||||||||||| ||||||||||| || || ||||||||||| Sbjct 12690 TCGCCGCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAACG 12749 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||| ||||| ||||||||||| |||||| || ||||| Sbjct 12750 AGCTCATCTCCCGTGACGAGGGTCTCCACACCGACTTTGC 12789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739203176640