Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 165 1e-35 seq162 84.2 3e-11 seq199 82.4 9e-11 >seq2 Length=859439 Score = 165 bits (182), Expect = 1e-35 Identities = 387/573 (68%), Gaps = 17/573 (3%) Strand=Plus/Minus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || || || || ||||| || |||||||| | ||| || | ||| ||| || | Sbjct 394437 GGCAGGGCGATCGACGCGAGGTTGCACACGGCTACCTCATCGGGG-CGGAGTACTCGACG 394379 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || ||||| |||| ||| || ||||| || |||| ||||||||| || || | Sbjct 394378 ATCTCCGTGCACAGGTTAGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTCTTG 394319 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 ||||| || ||||| || |||||||| ||||| || || || ||||| | || |||||| Sbjct 394318 TTGCAGGCGTCCTTGTACAGCATGTACGGGGTTCCCGTCTCGGTCTGCGCCTCCAGAATG 394259 Query 110461 GCCTTCCATACATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTC---CTCCTCGT 110515 || | || | || ||| | | || || |||| ||||| || | || ||||| Sbjct 394258 GCATACCCAGCTTCTGCGCCTTG-ACGGTCCTGCGC--GCGAGGCCGGCGGTCTTCTCGT 394202 Query 110516 ACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGT 110575 | |||||| | || || || |||| ||||| ||||| ||||| || | |||| || Sbjct 394201 AGCGGGTGTAGAGCTC-TCGAACTCCTCGCCGTAAACATCCGAAAGGCCGGTAGCCTCGT 394143 Query 110576 CGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAA 110635 || ||||| ||| ||| | || || ||| |||||||||||||||||||| || | Sbjct 394142 TAGGGCAGAACAGGCTCCAGTCACCGTTCTGCTCGACCCTCTTCATGAACAGGTCGGGCA 394083 Query 110636 TCCACATCGCCGAGAAAAGGTCAC-GGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGT 110694 ||| | || |||| ||||| | ||| || ||||||| | ||| ||||| || Sbjct 394082 CCCAGAGGGCGTAGAACAGGTCCCTGGCCCTGA-CCTCTTCCTTACCGTGGTTCTTTCGG 394024 Query 110695 AGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATC-- 110752 || || | || || | | |||| |||||| || ||||| |||| |||| | | Sbjct 394023 AGGTCGAGGAACTCGAACACGTCCGCGTGCCACGGCTCGAGGTAGATTGCGAAAGCACCG 393964 Query 110753 --CCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCAT 110810 |||| | | || |||||| || || | || ||| ||||| ||||| ||||| Sbjct 393963 GGCCTTTTGTTG-CCGCCCTGGTCGACGTACCTGGCCGTGTTGTTGAACACCCTCAGCAT 393905 Query 110811 AGGAATAATTCCATCGGATTGACCATTTGTACC 110843 || || | |||| ||| |||||| || || Sbjct 393904 CGGGATGAGACCATTGGAAGTACCATTGGTCCC 393872 Score = 116 bits (128), Expect = 4e-21 Identities = 297/443 (67%), Gaps = 7/443 (2%) Strand=Plus/Minus Query 109399 GCCTTCGAGCGAAGATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGC 109458 ||| | | ||| | ||| ||||| ||||| |||||||| |||||| |||| | ||| Sbjct 395308 GCCATGGTGCGTAAATAGTACATTCCCGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGC 395249 Query 109459 ATTGAAGAGAGTTTGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGA 109518 || || | ||||| | | || || | || | ||||| |||||| ||| Sbjct 395248 ATAGACGTAAGTTTACCCATGTTGGGTCTTTA-ATGTGGATGTTCAGCGACTGGCTCTGG 395190 Query 109519 TCGATGAAT-CGACCACGATCAGCCGCCATGTCGATGATACACTTTTGGCTA-ATTTCCC 109576 |||||||| || | | || ||||||||||||||||| |||||| | | || |||| Sbjct 395189 TCGATGAACGCGGACCTG-TCTGCCGCCATGTCGATGATT-ACTTTTTGTGAGATCTCCC 395132 Query 109577 AGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTTTTGAATAGAGC 109636 |||| |||||||||| || || || | ||| |||| | |||||| || || || | Sbjct 395131 AGACGGTCTTGTACAGCGATTTTATGTCCTTGGGTATGTTCGGGATGTTCTGGATGGAAC 395072 Query 109637 CACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGA-CCAGAGACCGACCTTTTTGAGA 109695 | | | ||| | | |||||| | | ||| ||||||||| | | ||| Sbjct 395071 CGTTGTCGGCGATGATGCGGTTCTTCATGT-TATCGCTCCAGAGACCCAGTTCGACGAGG 395013 Query 109696 TCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAG 109755 || | | || | ||| || | ||||| || || || ||| ||| |||| Sbjct 395012 TCCTTTAGCAGCCACGGGTTTACGATCTGGAATTCGCCGGCGAGGACGCGGCGGGAGTAG 394953 Query 109756 ATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCT 109815 ||||| | ||||||||||||||| ||||| ||| || ||||| || | |||||||| Sbjct 394952 ATGTTGGACGTGTAGGGTTCGAAGCACTCGTTGAAACCGAGGATCTGGGACGTGGAAGCG 394893 Query 109816 GTGGGCATGGGAGCCATGAGAAG 109838 || |||||||| || | ||| || Sbjct 394892 GTAGGCATGGGCGCGACGAGGAG 394870 >seq162 Length=94999 Score = 84.2 bits (92), Expect = 3e-11 Identities = 166/244 (68%), Gaps = 5/244 (2%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || || || || || ||||||||||| || |||| || || Sbjct 12790 GGCAAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCC 12731 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 |||||||| || | ||||| ||||| |||||||| || ||| |||||||| Sbjct 12730 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAGAT 12671 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGAC----TTGTCGA 119670 || || || ||| ||||||| ||||||| || |||||| || | | |||| Sbjct 12670 ACCTTCGACGGCGGCAAAAGCGACGAGACGCTGGGC-AAAGGTGGACTCGTCGTCCTCGA 12612 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730 ||| || ||||||| |||||| || ||||| |||| || | ||| || |||| Sbjct 12611 TCCAGCGGATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTCGA 12552 Query 119731 AAAG 119734 | || Sbjct 12551 AGAG 12548 >seq199 Length=76504 Score = 82.4 bits (90), Expect = 9e-11 Identities = 198/285 (69%), Gaps = 16/285 (6%) Strand=Plus/Minus Query 11674 TTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGT 11733 || || | |||||| |||| ||| | ||||| || || || ||| ||||||| | Sbjct 56180 TTTCCAATAGCGTCGATCT-ATCTACGAATATAATGCAAGGCGCGTTTTTGCGTGCCTTT 56122 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTG-- 11791 ||||||| || || || | | | ||| |||| || |||||||| ||||| | | Sbjct 56121 GCGAAAAGATC-CGAACTCTCGATGGTCCGACACG-ACAAACATCTCGACGAATTCCGAT 56064 Query 11792 CGGCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGC-TCGAGCGAGGAGA 11850 | || || | ||||| |||||| || | || || || || | || | |||||| ||| Sbjct 56063 CCGCTGA-CGCTGAA-GAAGGGCACCTGAGCTTCCCCCGCCGTAGCCTTTAGCGAGAAGA 56006 Query 11851 GTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCA--C 11908 ||||||||||| || |||| ||| |||| || || || || || ||||||||| | Sbjct 56005 GTCTTACCCGTTCCGGGTGGACC--GAAGAATTGCACCGCGTGGTATTTTGGCACCAAGC 55948 Query 11909 TTCCAAAGTAG-CGCTCAGGCTTCTTGAGGAAGTCCACAATCTCC 11952 ||| |||| ||| | |||| || |||||| | ||| | |||| Sbjct 55947 TTC--TGGTAGACGC-CGGGCTCCTGGAGGAATTTCACGAACTCC 55906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972966773600