Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq2 214 2e-50 seq162 107 2e-18 >seq2 Length=859439 Score = 214 bits (236), Expect = 2e-50 Identities = 615/932 (66%), Gaps = 23/932 (2%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || |||||||| || || | ||||| || || |||||| | | |||||| | Sbjct 394437 GGCAGGGCGATCGACGCGAGGTTGCACACGGCTACCTCATCGGGG-CGGAGTACTCGACG 394379 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || |||| ||| || ||||| ||||| |||| ||||| ||||| ||||| ||| Sbjct 394378 ATCTCCGTGCACAGGTTAGAGCTCTTGATCGTGCCCAGGTTCTTCTGGTTGCTCTTCTTG 394319 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| || |||||||| |||||||| || || |||||||| ||||| | || ||||| Sbjct 394318 TTGCAGGCGTCCTTGTACAGCATGTACGGGGTTCCCGTCTCGGTCTGCGCCTCCAGAATG 394259 Query 106637 GCCTTCCACACATCGGCGGCT----GGTACAATG-GCGTTGGCCCGTCCCTCCGCCTCGT 106691 || | || | || ||| || ||| | || ||| | ||| | || | |||| Sbjct 394258 GCATACCCAGCTTCTGCGCCTTGACGGTCC--TGCGCGCGAGGCCGGCGGTCTTC-TCGT 394202 Query 106692 ACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGT 106751 | |||||||| || | |||||||| || | || || || || | |||| || Sbjct 394201 AGCGGGTGTAGAGCTCT-CGAACTCCTCGCCGTAAACATCCGAAAGGCCGGTAGCCTCGT 394143 Query 106752 CTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 106811 || ||||| || ||| | ||| || ||| |||| ||||||||| ||||| || | Sbjct 394142 TAGGGCAGAACAGGCTCCAGTCACCGTTCTGCTCGACCCTCTTCATGAACAGGTCGGGCA 394083 Query 106812 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTA 106871 ||| |||| | || || || || || ||||||| | ||| ||||| ||| | Sbjct 394082 CCCAGAGGGCGTAGAACAGGTCCCTGGCCCTGACCTCTTCCTTACCGTGGTTCTTTCGGA 394023 Query 106872 ACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC--- 106928 || |||||||| | | ||||||||||| ||||| || |||| ||||| || | Sbjct 394022 GGTCGAGGAACTCGAACACGTCCGCGTGCCACGGCTCGAGGTAGATTGCGAAAGCACCGG 393963 Query 106929 -CCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATT 106987 ||||| | | || | || | || || | || ||| ||| || || | ||||| Sbjct 393962 GCCTTTTGTTG-CCGCCCTGGTCGACGTACCTGGCCGTGTTGTTGAACACCCTCAGCATC 393904 Query 106988 GGAATAATACCATCTGATTGACCATTTGTCCCCCGA-ATACGAGATTTATTGGCTCTCAC 107046 || || | ||||| || |||||| ||||| ||| |||||| | | | | Sbjct 393903 GGGATGAGACCATTGGAAGTACCATTGGTCCCGCGATGTACGAG--CCCGTAGAACGGAT 393846 Query 107047 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 || |||| ||| | || ||| | || || ||| ||||| || || | |||| Sbjct 393845 ATTGTGGACGTGAAGACCGATA-CACCGGCAGTCTTCGAGATCAATGCGCAGGTCTTAAG 393787 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166 || | |||||||| | || ||| ||||| |||||| |||||||| | || Sbjct 393786 GGTATCGTAGATACCTTCAATACTGTCATCCTTCATGGCGACGAGGAAGCACGAGCTCAG 393727 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG 107226 |||||| || ||||| || ||||| || || || | ||||| ||| | | |||| Sbjct 393726 CTGCGGCTGGGGGGTACCCGCGTTGAACAGCGTCGGCGAAGCGTGGGTGA--AGAACTTG 393669 Query 107227 --GGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 | ||| ||||| ||||| | || || ||||| || ||||||||||| | | Sbjct 393668 CTGCTCATGAGCTCGTACGTCTCGATCACCTTCTCGATGTCCTCGCCGTGGATGCCTACG 393609 Query 107285 GCCACACGCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA 107344 || || ||||| | ||||| || || | || || | ||| | || || |||| Sbjct 393608 GCGACGCGCATGATCATGTGCTGCGGCCTCTCGGCGACGGCGCCGTTGATGCGGAGAAGG 393549 Query 107345 TAGCTCTTCTCAAGGGTTTTGAGACCAAAGTA 107376 ||| ||| ||||| |||| || ||||| Sbjct 393548 TAGGAGCGCTCGAGGGTCTTGAAGCCGAAGTA 393517 >seq162 Length=94999 Score = 107 bits (118), Expect = 2e-18 Identities = 170/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || |||||||||||| || ||||| || || || || |||||| ||||| Sbjct 12790 GGCAAAGTCGGTGTGGAGACCCTCGTCACGGGAGATGAGCTCGTTGGAGAAGGTCAGGCC 12731 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||| | ||| | || ||| |||||| || ||||||||| Sbjct 12730 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGCGGCGAATGAACCACTGAAGAAGAT 12671 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451 ||| || || ||||| || | || |||| ||| |||| | || | | || || | Sbjct 12670 ACCTTCGACGGCGGCAAAAGCGACGAGACGCTGGGCAAAGGTG-GACTCGTCGTCCTCGA 12612 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 117511 ||| || ||||| | |||||||||| || || || | || | ||| || || | Sbjct 12611 TCCAGCGGATGGCCCAGTCGGCCTTCTTCTTGATGCACGGGATGGTCTCGATAGCGTCGA 12552 Query 117512 A 117512 | Sbjct 12551 A 12551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977761598880