Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq249 86.0 4e-12 >seq249 Length=58106 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 ||||| || ||||||||||| || || | || ||| || ||||| |||||||| || Sbjct 56498 TCTTT-TGGATGTTATAGTCGGACAGCGTGCGGCCATTTTCGAGCTGCTTTCCGGCGAAG 56440 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | |||||||| ||||| |||| | Sbjct 56439 ATCAGACGCTGCTGGTCGAGCGGGATGTATTCCTTGTCTTGGATCTTGGCCTTGA-TATT 56381 Query 34911 GCT-ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | | || | ||| || |||||| |||| ||| || || || |||||||| ||||| || Sbjct 56380 GTTGATGGTGTCAGAGGACTCAACCTCGAGGGTGAT-GTCTTGCCCGTGAGGGTCTTGAC 56322 Query 34970 AAAGATCTGCATATT 34984 ||||||||||| || Sbjct 56321 GAAGATCTGCATTTT 56307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631969933536