Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq91 86.0 5e-12 >seq91 Length=152461 Score = 86.0 bits (94), Expect = 5e-12 Identities = 123/171 (72%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 30115 AGCTGATCCACCCCCATCCCCGAGTAGTCTG-CCCTCATGTCCGTGTACTCTGCTCCGAA 30173 ||||||||||| ||| |||||| || || | | | || |||| || || || ||||| Sbjct 104636 AGCTGATCCACTCCCTTCCCCGTATAATCCGTCTCGCA-GTCCACATATTCGGCACCGAA 104694 Query 30174 ATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCC 30233 ||||| ||||||||| ||||| |||||||| ||||| || |||| | | | || ||| Sbjct 104695 ATGCCGCCACTGGAAACCGTAGACCGGTCCGAGGTCGCCTTCTTTACGCTCCGTGAGGCC 104754 Query 30234 CCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC 30284 | ||| | | | | ||| |||||| ||||||| ||||| || || Sbjct 104755 GATGGAGTCGAGGTATGCGCGGGAGCCGTTGCCGTCCCATATCTTCACGCC 104805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615548228876