Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq346 111 1e-19 >seq346 Length=29424 Score = 111 bits (122), Expect = 1e-19 Identities = 147/203 (72%), Gaps = 1/203 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| ||||| || || ||||||||||| | || ||| || | || |||| ||| Sbjct 5340 TGAAGGGTGGATTCCTTCTGAATATTGTAATCAGAGAGAGTCCTTCCGTCTTCCAGCTGC 5281 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || || | ||||| || || || || || || || ||||| ||||| || Sbjct 5280 TTACCAGCGAAGATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATCCTGAATCTTG 5221 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| || | || || || || |||| || || || ||| Sbjct 5220 GCCTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCCAGCGTGATGGTCTTTCCAGTT 5161 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 ||||| || ||||| |||||||| Sbjct 5160 AAAGTCTTCACAAA-ATCTGCAT 5139 Score = 98.7 bits (108), Expect = 8e-16 Identities = 145/203 (71%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 |||||||| || || || || || || ||||||| | ||| | | | || || | ||| Sbjct 5113 TGAAGGGTGGACTCCTTCTGGATGTTATAATCGGACAGAGTCCGGCCGTCCTCGAGCTGC 5054 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| || || || | |||||| |||||||| ||||||||||| || || ||||| || Sbjct 5053 TTACCGGCGAAGATGAGACGCTGCTGATCGGG-GGAATGCCTTCCTTGTCCTGAATCTTC 4995 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | |||| |||||||| | || || || || |||| || || || || Sbjct 4994 GCCTTGACATTGTCTATCGTGTCAGAGGACTCAACCTCGAGCGTGATAGTCTTTCCCGTA 4935 Query 101447 AAAGTTTTTACAAATATCTGCAT 101469 | || || || || || ||||| Sbjct 4934 AGCGTCTTGACGAA-ATTTGCAT 4913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396276410187084