Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq346 107 1e-18 >seq346 Length=29424 Score = 107 bits (118), Expect = 1e-18 Identities = 139/191 (73%), Gaps = 1/191 (1%) Strand=Plus/Minus Query 48576 TCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAAT 48635 || || ||||||||||||||||| ||| | | |||| |||| ||||||||| || || Sbjct 5328 TCCTTCTGAATATTGTAATCAGAGAGAGTCCTTCCGTCTTCCAGCTGCTTACCAGCGAAG 5269 Query 48636 ATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAA 48695 || || ||||| || |||| ||| | |||||||| || |||||| || ||| Sbjct 5268 ATAAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTATCCTGAATCTTGGCCTTCACATTG 5209 Query 48696 CCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACA 48755 | | | || || | ||| ||||||| ||| || || ||||| || ||||| || || Sbjct 5208 TCGATGGTGTCGGAAGACTCAACCTCCAGCGTGATGGTCTTTCCAGTTAAAGTCTTCAC- 5150 Query 48756 AAAATCTGCAT 48766 ||||||||||| Sbjct 5149 AAAATCTGCAT 5139 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/203 (70%), Gaps = 2/203 (1%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| || || || || ||||| || ||| | || |||| || | |||| Sbjct 5113 TGAAGGGTGGACTCCTTCTGGATGTTATAATCGGACAGAGTCCGGCCGTCCTCGAGCTGC 5054 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 |||||||| || || || ||||| |||| || ||||| ||| |||||||| |||||| Sbjct 5053 TTACCGGCGAAGATGAGACGCTGCTGAT-CGGGGGAATGCCTTCCTTGTCCTGAATCTTC 4995 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || || | ||| ||||| | ||| || || |||||||| Sbjct 4994 GCCTTGACATTGTCTATCGTGTCAGAGGACTCAACCTCGAGCGTGATAGTCTTTCCCGTA 4935 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 | || || || |||| ||||| Sbjct 4934 AGCGTCTTGAC-GAAATTTGCAT 4913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935687217076