Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq2 206 5e-48 seq162 201 2e-46 >seq2 Length=859439 Score = 206 bits (228), Expect = 5e-48 Identities = 784/1212 (65%), Gaps = 39/1212 (3%) Strand=Plus/Minus Query 221427 CGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGG 221486 |||||||||| ||||| |||||| ||| || ||| |||| || || ||| | Sbjct 394695 CGTGGTAGATCGTCTCGAAGATCTGGAGGTTCAGCTGCTTAGCCTGCGGCGAGTCGAACG 394636 Query 221487 GCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGT 221546 ||||||||||| | |||| | || || || ||||| || |||| | || || |||| Sbjct 394635 GCATACGCAGCGCCAAAAAGGCATCCGCGAGACCCTGAACGCCGACGGC-ATAGGTCTGT 394577 Query 221547 GTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGT 221606 | | |||||| ||| || | ||||| || ||||||| ||||| | |||| Sbjct 394576 GGCGGAAGTTGGAGTTCCTGGCTCCTCG-ACGGGGTAGTAGTTGACCTCGATGATCTTGT 394518 Query 221607 TGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACT 221666 | || || | || ||| || ||| ||| ||||||||| || | ||| Sbjct 394517 TCAGATTGCGGACGACGACCTTCGTCACGTCGTGGAGCTTCTGG------AAGTCGTACT 394464 Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACA 221726 || | | ||| | | ||||| || | ||||| | || ||||| |||| Sbjct 394463 CG--GACTTCGCGATG----TCCACGAACGTCGGCAGGGCGATCGACGCGAGGTTGCACA 394410 Query 221727 CGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGA 221786 |||| ||||| || | || |||| | |||||| || || ||||| || ||||| Sbjct 394409 CGGCTACCTCATCGGGGC-GGAGTACTCGACGATCTCCGTGCACAGGTTAGAGCTCTTGA 394351 Query 221787 TGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGG 221846 | || ||||||| || || || ||| ||| ||||||||||| ||||| | | Sbjct 394350 TCGTGCCCAGGTTCTTCTGGTTGCTCTTCTTGTTGCAGGCGTCCTTGTACAGCATGTACG 394291 Query 221847 GACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGT-CCCAGAGTTCTCTGGCGC--TCA 221903 | || ||||| ||| ||| ||||||| | ||||| |||| |||| | | Sbjct 394290 GGGTTCCCGTCTCGGTCTGCGCCTCCAGAATGGCATACCCAGC-TTCT---GCGCCTTGA 394235 Query 221904 CCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTT 221963 | ||||| | || ||||||| || || | ||| |||||| | || |||| | Sbjct 394234 CGGTCCTGCGCGCGAGGCCGGCGGTCTTCTCGTAGCGGGTGTAGAGC-TCTCGAACTCCT 394176 Query 221964 CACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGT 222023 | ||||| | || ||||| | | | | || || | ||| ||||||| || Sbjct 394175 CGCCGTAAACATCCGAAAGGCCGGTAGCCTCGTTAGGGCAGAACAGGCTCCAGTCACCGT 394116 Query 222024 TGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGG 222083 | | | |||||||| |||||| ||||| || | ||| || || | || || || |||| Sbjct 394115 TCTGCTCGACCCTCTTCATGAACAGGTCGGGCACCCAGAGGGCGTAGAACAGGTCCCTGG 394056 Query 222084 TCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGT 222143 || ||| ||| |||| ||| || | || || | ||||| || | ||| |||| Sbjct 394055 CCCTGACCTCTTCCTTACCGTGGTTCTTTCGGAGGTCGAGGAACTCGAACACGTCCGCGT 393996 Query 222144 GCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCA 222203 |||||||||| || |||| || | ||| ||||| | |||||||| ||||| || || Sbjct 393995 GCCACGGCTCGAGGTAGATTGCGAAAGCACCGGGCCTTTTGTTGCCGCCCTGGTCGACGT 393936 Query 222204 TCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGG 222263 ||| || |||||| | | || |||| | || || ||||| ||| |||| Sbjct 393935 ACCTGGCCGTGTTGTTGAACACCCTCAGCATCGGGATGAGACCATTGGAAGTACCATTGG 393876 Query 222264 TGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATG----CCGATACCA 222319 | ||| ||||||| ||| | || || | | ||| || |||||| || Sbjct 393875 T-CCCGCGATGTACG---AGCCCGTAGAACGGATA-TTGTGGACGTGAAGACCGATA-CA 393822 Query 222320 CCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAG 222379 ||||| |||||||||| |||||| |||| || || || ||| || || ||| | Sbjct 393821 CCGGCAGTCTTCGAGATCAATGCGCAGGTCTTAAGGGTATCGTAGATACCTTCAATACTG 393762 Query 222380 TCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTA 222439 || ||||| | | | || || || || || ||| | | || || || ||||| Sbjct 393761 TCATCCTTCATGGCGACGAGGAAGCACGAGCTCAGCTGCGGCTGGGGGGTACCCGCGTTG 393702 Query 222440 AACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACG 222499 |||||||| || ||||| || ||| | || ||| || ||||||||||| | Sbjct 393701 AACAGCGTCGGCGAAGCGTGGGTGAAGAACTTGCTGCTCATGAGCTCGTACGTCTCGATC 393642 Query 222500 ACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGC 222559 || | |||||| || ||||| || | |||| | |||| ||||| ||| ||| Sbjct 393641 ACCTTCTCGATGTCCTCGCCGTGGATGCCTACGGCGACGCGCATGATCATGTGCTGCGGC 393582 Query 222560 CTCT---CCACAGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAAC 222616 |||| | || | || ||| || ||||| ||||| || || || |||||||| Sbjct 393581 CTCTCGGCGACGGCGCCGTTGATGC-GGAGA--AGGTAGGAGCGCTCGAGGGTCTTGAAG 393525 Query 222617 CCAAAGTAGTTG 222628 || ||||||||| Sbjct 393524 CCGAAGTAGTTG 393513 >seq162 Length=94999 Score = 201 bits (222), Expect = 2e-46 Identities = 564/858 (66%), Gaps = 29/858 (3%) Strand=Plus/Plus Query 25478 TATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTGG 25537 ||||| | |||||||||||||| | || ||||||||||||||| || ||||| Sbjct 12237 TATGGCAAATGTACAAGAAGGCCGAGGCATCGTTCTGGACCGCCGAAGAAATCGATCTCT 12296 Query 25538 CCAAGGACATGGACGGCTGGTAC-----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 ||||||| | | || |||| || ||| | | | ||||||| | ||| || Sbjct 12297 CCAAGGATCTCGGCGACTGGAACAACAGGCTGAA--CGACGACGAGCGCTACTTTATCTC 12354 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652 |||| | || ||||| || |||||||| ||||| || |||||||| || | || | Sbjct 12355 TCACGTCCTTGCCTTCTTCGCCGCCTCTGACGGTATCGTCAACGAGAACCTCGTCCAGCG 12414 Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 |||| || || |||||| | || ||| || |||||||| || ||||| || Sbjct 12415 CTTCAGCAATGAGGTGCAGATCCCCGAAGCCCGCTGCTTCTACGGCTTTCAGATCATGAT 12474 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACG-TACAT-TACAGACGTC 25770 || || | ||||| || || | || ||||| || ||| | || | | Sbjct 12475 GGAGAACATTCACTCGGAAACCTACTCT---CTCCTGAT--CGATACCTATATCAAGGAG 12529 Query 25771 GCCGAG-AGAGATCGG--CTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827 || || || | | || || | || |||||| ||| || ||||||||| |||| Sbjct 12530 CCCAAGCAGCGCACCTATCTCTTCGACGCTATCGAGACCATCCCGTGCATCAAGAAGAAG 12589 Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTACGTTTGGCGAGCGGCTGGT 25886 || |||||||| |||||| | | | ||| | || |||| | |||| || || Sbjct 12590 GCCGACTGGGCCATCCGCTGGATCGAGGACGACGAGTCC-ACCTTTGCCCAGCGTCTCGT 12648 Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946 || ||||| || || || || ||||| ||||| ||||| || || |||||||||||||| Sbjct 12649 CGCTTTTGCCGCCGTCGAAGGTATCTTCTTCAGTGGTTCATTCGCCGCCATCTTCTGGCT 12708 Query 25947 CAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGA 26006 |||| || || ||||||||| ||| ||| ||||||||||||||| | | ||||| Sbjct 12709 CAAGAAGCGTGGTCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGTGACGA 12768 Query 26007 GGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAA-ACCTT 26065 ||||||||||| || ||||||||||| |||| || |||| ||| |||| | | Sbjct 12769 GGGTCTCCACACCGACTTTGCCTGCCTCCTCTTCA---GCCA---TCTCAACAACAGCCG 12822 Query 26066 CTCAA-GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNN 26124 ||| ||| ||||| | | ||||| ||||| || ||| ||| ||||||| | Sbjct 12823 AGCAAGGAGGCCGTCGAAGCTGTCATCGTTGAGGCCGTTACGATTGAGCAGGAGTTCCTT 12882 Query 26125 NNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATT 26184 ||||||| ||| || || |||| |||||||| Sbjct 12883 ACGGAGGCTCTCCCGTGCGCTCTCTTGGGCATCAACGCCAAGCTGATGAAGCAATACATC 12942 Query 26185 GAGTATGTGGCCGACCATCTGC-TGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCC 26243 |||| || ||||||| |||| |||| | || || | | |||||| | | Sbjct 12943 GAGTTCGTCGCCGACCGCCTGCTTGTGGC-CCTCGGCAACAGGAAGGTCTACAACTCTGC 13001 Query 26244 TAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAA 26303 ||||| |||||||| ||||| || |||| || ||||||||||| || || || Sbjct 13002 GAACCCCTTCGACTTCATGGAGTCGATCAGCTTGGCTGGCAAGACCAACTTTTTCGAGAA 13061 Query 26304 GAGGGTCGGCGACTATCA 26321 | | ||| ||||| || Sbjct 13062 GCGTGTCTCGGACTACCA 13079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928840016449280