Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq346 86.0 4e-11 >seq346 Length=29424 Score = 86.0 bits (94), Expect = 4e-11 Identities = 150/217 (69%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || ||||| ||||| || || || | |||||||| | ||||| Sbjct 5132 ACGGAGACGAAGGACAAGGTGAAGGGTGGACTCCTTCTGGATGTTATAATCGGACAGAGT 5073 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | || || || ||||| || || || || ||||| || ||||| || ||||| || Sbjct 5072 CCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATGAGACGCTGCTGATCGGG-GGAATGCC 5014 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||||||||| |||||||| |||||| || || || |||| | | || || Sbjct 5013 TTCCTTGTCCTGAATCTTCGCCTTGACATTGTCTATCGTGTCAGAGGACTCAACCTCGAG 4954 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATT 480767 || ||||| || || || || ||||| |||||| || Sbjct 4953 CGTGATAGTCTTTCCCGTAAGCGTCTTGACGAAATTT 4917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268161527320976