Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: fungal_20sp._20ARF18_20[genbank_20GCA_5F002224055.1_202017-07-24] 412 sequences; 46,394,168 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq104 123 3e-23 >seq104 Length=139193 Score = 123 bits (136), Expect = 3e-23 Identities = 182/258 (71%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 139298 CATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAAT 139357 |||||| || | || || || || ||||| |||||||| || ||||| || || | || Sbjct 67246 CATATTCGCCAACAACGCCTGCGCCGTGCAAATGTTACTAGTCGCTTTTTCCCTGCGGAT 67305 Query 139358 ATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGA 139417 |||||||||||| || || || || || ||||| || || || ||||| | || Sbjct 67306 ATGCTGCTCTCTCGTCTGCAGCGCCAACCTGTACGCCTTATCCCCGCTCCTGTCGATCGA 67365 Query 139418 CTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGC 139477 ||| | | || || || ||||| ||||||||| || || || || ||||| | Sbjct 67366 AACACCGATCAACCTTCCCGGCATCTTCCTCTTATACGCATCCGTCGTCGCGAAGAAACC 67425 Query 139478 AGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAGCAAT 139537 || ||||| || ||||| ||||| |||| || || |||||| | | || | ||| || Sbjct 67426 CGCGTGAGGCCCACCGTAGCCCATCGGAACCCCGAATCTTTGCGCATTTCCGAAAGCGAT 67485 Query 139538 ATCAAATCCCCACTCACC 139555 ||| |||||||||||| Sbjct 67486 ATCGGCTCCCCACTCACC 67503 Score = 82.4 bits (90), Expect = 9e-11 Identities = 123/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 ||||||||||| || || ||||| || || || || || ||||||||||| |||||||| Sbjct 66069 ACACCAATAGGTCCGACTCCAGGCCCGCCTCCACCGTGCGGAATACAGAACGTCTTATGA 66128 Query 138243 AAATTTAGATGACATACATCTGCACC-ATAGTCACATGGTTTTGCTAGACCTACCTGTGC 138301 | ||| || || |||||||| || || ||| | || || | || || | ||| || Sbjct 66129 AGATTAAGGTGGCATACATCCGCTCCAATACTTCCA-GGCGACGTCAGCCCGATCTGCGC 66187 Query 138302 ATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATC 138353 || | || || || || | ||| ||||| || || | || || |||||| Sbjct 66188 GTTCATGTTCGCGCCGTCCATATAAACCTGCCCGCCGTGCTCGTGCACGATC 66239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578995418158240